Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH8P55286 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH8P55286 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CDH8P55286 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 AGAP10P-201ENST00000454844 2418 ntBASIC15.22■□□□□ 0.03
CDH8P55286 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDH8P55286 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH8P55286 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH8P55286 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 AC026320.2-201ENST00000434379 478 ntBASIC15.22■□□□□ 0.03
CDH8P55286 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 KRT18P15-201ENST00000458108 1291 ntBASIC15.22■□□□□ 0.03
CDH8P55286 AC242376.1-201ENST00000559033 726 ntBASIC15.22■□□□□ 0.03
CDH8P55286 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH8P55286 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 MIR4754-201ENST00000582477 89 ntBASIC15.22■□□□□ 0.03
CDH8P55286 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 AC012044.1-201ENST00000603431 297 ntBASIC15.22■□□□□ 0.03
CDH8P55286 AL353770.1-201ENST00000614915 403 ntBASIC15.22■□□□□ 0.03
CDH8P55286 BAP1-211ENST00000615113 489 ntBASIC15.22■□□□□ 0.03
CDH8P55286 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 AC091812.3-201ENST00000621362 345 ntBASIC15.22■□□□□ 0.03
CDH8P55286 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDH8P55286 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH8P55286 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH8P55286 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH8P55286 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH8P55286 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDH8P55286 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CDH8P55286 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CDH8P55286 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH8P55286 KRT8P24-201ENST00000560290 1559 ntBASIC15.21■□□□□ 0.03
CDH8P55286 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 AC103592.1-201ENST00000394513 664 ntBASIC15.21■□□□□ 0.03
CDH8P55286 HMGA1P1-201ENST00000415560 1062 ntBASIC15.21■□□□□ 0.03
CDH8P55286 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH8P55286 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH8P55286 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH8P55286 RPSAP15-201ENST00000448168 861 ntBASIC15.21■□□□□ 0.03
CDH8P55286 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH8P55286 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH8P55286 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH8P55286 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH8P55286 AC008723.1-201ENST00000506922 207 ntBASIC15.21■□□□□ 0.03
CDH8P55286 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH8P55286 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDH8P55286 KRT8P1-201ENST00000557533 1207 ntBASIC15.21■□□□□ 0.03
CDH8P55286 AC084346.2-201ENST00000607097 949 ntBASIC15.21■□□□□ 0.03
CDH8P55286 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH8P55286 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH8P55286 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH8P55286 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH8P55286 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH8P55286 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDH8P55286 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.21■□□□□ 0.02
CDH8P55286 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH8P55286 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH8P55286 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH8P55286 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDH8P55286 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CDH8P55286 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH8P55286 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH8P55286 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH8P55286 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH8P55286 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms