Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
LHX2P50458 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.71□□□□□ -0.38
LHX2P50458 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.71□□□□□ -0.38
LHX2P50458 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
LHX2P50458 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
LHX2P50458 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LHX2P50458 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.71□□□□□ -0.38
LHX2P50458 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 MIR600HG-201ENST00000449175 5984 ntBASIC12.7□□□□□ -0.38
LHX2P50458 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.7□□□□□ -0.38
LHX2P50458 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.7□□□□□ -0.38
LHX2P50458 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.7□□□□□ -0.38
LHX2P50458 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.7□□□□□ -0.38
LHX2P50458 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.7□□□□□ -0.38
LHX2P50458 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.7□□□□□ -0.38
LHX2P50458 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 AC138701.2-201ENST00000553634 226 ntBASIC12.7□□□□□ -0.38
LHX2P50458 AL031713.1-201ENST00000564813 661 ntBASIC12.7□□□□□ -0.38
LHX2P50458 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.7□□□□□ -0.38
LHX2P50458 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.7□□□□□ -0.38
LHX2P50458 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.7□□□□□ -0.38
LHX2P50458 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 AC073352.2-201ENST00000609385 439 ntBASIC12.7□□□□□ -0.38
LHX2P50458 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 YRDCP1-201ENST00000621419 643 ntBASIC12.7□□□□□ -0.38
LHX2P50458 AP001184.1-201ENST00000637936 376 ntBASIC12.7□□□□□ -0.38
LHX2P50458 AC006372.4-201ENST00000624122 1543 ntBASIC12.7□□□□□ -0.38
LHX2P50458 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 HSPA7-201ENST00000445535 1927 ntBASIC12.7□□□□□ -0.38
LHX2P50458 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.7□□□□□ -0.38
LHX2P50458 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LHX2P50458 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LHX2P50458 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LHX2P50458 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.69□□□□□ -0.38
LHX2P50458 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LHX2P50458 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LHX2P50458 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LHX2P50458 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LHX2P50458 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.69□□□□□ -0.38
LHX2P50458 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.69□□□□□ -0.38
LHX2P50458 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LHX2P50458 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms