Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN1P35523 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLCN1P35523 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN1P35523 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
CLCN1P35523 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN1P35523 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLCN1P35523 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN1P35523 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLCN1P35523 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLCN1P35523 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.34■□□□□ 0.21
CLCN1P35523 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.34■□□□□ 0.21
CLCN1P35523 HLA-K-203ENST00000430151 1046 ntBASIC16.34■□□□□ 0.21
CLCN1P35523 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.34■□□□□ 0.21
CLCN1P35523 SPCS2P1-201ENST00000561636 679 ntBASIC16.34■□□□□ 0.21
CLCN1P35523 CHCHD2P3-201ENST00000603038 451 ntBASIC16.34■□□□□ 0.21
CLCN1P35523 AL096865.1-201ENST00000606796 927 ntBASIC16.34■□□□□ 0.21
CLCN1P35523 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLCN1P35523 AC104758.3-203ENST00000562938 2123 ntBASIC16.34■□□□□ 0.21
CLCN1P35523 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN1P35523 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN1P35523 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CLCN1P35523 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CLCN1P35523 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN1P35523 GBP1P1-201ENST00000394662 1740 ntBASIC16.33■□□□□ 0.21
CLCN1P35523 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC16.33■□□□□ 0.21
CLCN1P35523 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN1P35523 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN1P35523 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CLCN1P35523 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
CLCN1P35523 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN1P35523 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
CLCN1P35523 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN1P35523 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC16.33■□□□□ 0.21
CLCN1P35523 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CLCN1P35523 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CLCN1P35523 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN1P35523 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.33■□□□□ 0.21
CLCN1P35523 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CLCN1P35523 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN1P35523 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.33■□□□□ 0.21
CLCN1P35523 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.33■□□□□ 0.2
CLCN1P35523 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN1P35523 DFFBP1-201ENST00000433250 979 ntBASIC16.33■□□□□ 0.2
CLCN1P35523 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 BCRP1-201ENST00000444246 691 ntBASIC16.33■□□□□ 0.2
CLCN1P35523 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN1P35523 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.33■□□□□ 0.2
CLCN1P35523 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN1P35523 RN7SL204P-201ENST00000582831 262 ntBASIC16.33■□□□□ 0.2
CLCN1P35523 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.33■□□□□ 0.2
CLCN1P35523 LINC02560-201ENST00000596379 459 ntBASIC16.33■□□□□ 0.2
CLCN1P35523 AC093813.1-201ENST00000605066 256 ntBASIC16.33■□□□□ 0.2
CLCN1P35523 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN1P35523 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLCN1P35523 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN1P35523 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms