Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.17■□□□□ 0.02
CTNNA1P35221 RN7SL752P-201ENST00000463779 287 ntBASIC15.17■□□□□ 0.02
CTNNA1P35221 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 AC078819.1-201ENST00000547454 765 ntBASIC15.17■□□□□ 0.02
CTNNA1P35221 AC012085.1-201ENST00000548270 765 ntBASIC15.17■□□□□ 0.02
CTNNA1P35221 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.17■□□□□ 0.02
CTNNA1P35221 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.17■□□□□ 0.02
CTNNA1P35221 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.17■□□□□ 0.02
CTNNA1P35221 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
CTNNA1P35221 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 AC233724.13-201ENST00000598383 410 ntBASIC15.17■□□□□ 0.02
CTNNA1P35221 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 AC138951.2-201ENST00000623455 1161 ntBASIC15.17■□□□□ 0.02
CTNNA1P35221 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CTNNA1P35221 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.17■□□□□ 0.02
CTNNA1P35221 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 AL354989.2-201ENST00000435838 1540 ntBASIC15.17■□□□□ 0.02
CTNNA1P35221 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.17■□□□□ 0.02
CTNNA1P35221 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTNNA1P35221 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CTNNA1P35221 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CTNNA1P35221 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 AL731571.1-201ENST00000617058 5428 ntBASIC15.16■□□□□ 0.02
CTNNA1P35221 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CTNNA1P35221 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.16■□□□□ 0.02
CTNNA1P35221 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.16■□□□□ 0.02
CTNNA1P35221 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 KRT90P-201ENST00000549264 1064 ntBASIC15.16■□□□□ 0.02
CTNNA1P35221 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.16■□□□□ 0.02
CTNNA1P35221 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CTNNA1P35221 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.16■□□□□ 0.02
CTNNA1P35221 AC008735.3-201ENST00000596646 500 ntBASIC15.16■□□□□ 0.02
CTNNA1P35221 AL022328.1-201ENST00000610050 478 ntBASIC15.16■□□□□ 0.02
CTNNA1P35221 ZACNP1-201ENST00000612259 710 ntBASIC15.16■□□□□ 0.02
CTNNA1P35221 AC244669.2-201ENST00000612320 853 ntBASIC15.16■□□□□ 0.02
CTNNA1P35221 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.16■□□□□ 0.02
CTNNA1P35221 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.16■□□□□ 0.02
CTNNA1P35221 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 BEND3P3-201ENST00000611030 2440 ntBASIC15.16■□□□□ 0.02
CTNNA1P35221 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CTNNA1P35221 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CTNNA1P35221 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CTNNA1P35221 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CTNNA1P35221 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
CTNNA1P35221 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTNNA1P35221 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CTNNA1P35221 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.15■□□□□ 0.02
CTNNA1P35221 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CTNNA1P35221 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CTNNA1P35221 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTNNA1P35221 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.15■□□□□ 0.02
CTNNA1P35221 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTNNA1P35221 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTNNA1P35221 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.15■□□□□ 0.02
CTNNA1P35221 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTNNA1P35221 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.15■□□□□ 0.02
CTNNA1P35221 AC016694.1-201ENST00000434179 700 ntBASIC15.15■□□□□ 0.02
CTNNA1P35221 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.15■□□□□ 0.02
CTNNA1P35221 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.15■□□□□ 0.02
CTNNA1P35221 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTNNA1P35221 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTNNA1P35221 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.15■□□□□ 0.02
CTNNA1P35221 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CTNNA1P35221 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.15■□□□□ 0.02
CTNNA1P35221 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.15■□□□□ 0.02
CTNNA1P35221 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.15■□□□□ 0.02
CTNNA1P35221 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTNNA1P35221 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CTNNA1P35221 TMBIM7P-202ENST00000641474 1516 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms