Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.46□□□□□ -0.25
CHMP24386 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.46□□□□□ -0.25
CHMP24386 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.46□□□□□ -0.25
CHMP24386 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.46□□□□□ -0.25
CHMP24386 AC008825.2-201ENST00000603374 718 ntBASIC13.46□□□□□ -0.25
CHMP24386 AC091271.1-201ENST00000611877 1162 ntBASIC13.46□□□□□ -0.25
CHMP24386 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CHMP24386 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHMP24386 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.46□□□□□ -0.25
CHMP24386 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.46□□□□□ -0.26
CHMP24386 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CHMP24386 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CHMP24386 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHMP24386 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.46□□□□□ -0.26
CHMP24386 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CHMP24386 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.45□□□□□ -0.26
CHMP24386 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 AC068760.1-201ENST00000493579 1953 ntBASIC13.45□□□□□ -0.26
CHMP24386 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CHMP24386 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CHMP24386 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 MIR326-201ENST00000362220 95 ntBASIC13.45□□□□□ -0.26
CHMP24386 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.45□□□□□ -0.26
CHMP24386 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.45□□□□□ -0.26
CHMP24386 RPSAP36-202ENST00000494591 1261 ntBASIC13.45□□□□□ -0.26
CHMP24386 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
CHMP24386 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 BX088702.1-201ENST00000610784 235 ntBASIC13.45□□□□□ -0.26
CHMP24386 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.45□□□□□ -0.26
CHMP24386 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.45□□□□□ -0.26
CHMP24386 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
CHMP24386 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
CHMP24386 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CHMP24386 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CHMP24386 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
CHMP24386 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.45□□□□□ -0.26
CHMP24386 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 Z82170.1-201ENST00000625081 3192 ntBASIC13.44□□□□□ -0.26
CHMP24386 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CHMP24386 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CHMP24386 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.44□□□□□ -0.26
CHMP24386 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.44□□□□□ -0.26
CHMP24386 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.44□□□□□ -0.26
CHMP24386 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CHMP24386 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 HIST2H2BB-201ENST00000449108 381 ntBASIC13.44□□□□□ -0.26
CHMP24386 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.44□□□□□ -0.26
CHMP24386 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
CHMP24386 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.44□□□□□ -0.26
CHMP24386 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CHMP24386 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.44□□□□□ -0.26
CHMP24386 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CHMP24386 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms