Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 AP3S2-216ENST00000617003 1561 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 AC060814.4-201ENST00000594169 2163 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
RAB4AP20338 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 AL031284.1-201ENST00000419297 478 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.03□□□□□ -0.64
RAB4AP20338 HIST3H2BA-201ENST00000436555 524 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 FAM210CP-201ENST00000445714 574 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 KRT18P35-201ENST00000510488 1269 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 IGHV3-22-201ENST00000520721 359 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 PDPK2P-202ENST00000562415 1191 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.03□□□□□ -0.64
RAB4AP20338 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.03□□□□□ -0.64
RAB4AP20338 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.03□□□□□ -0.64
RAB4AP20338 AL773604.1-201ENST00000617417 272 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 AC111170.3-201ENST00000624282 2464 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 FLJ30679-201ENST00000624773 1980 ntBASIC11.03□□□□□ -0.64
RAB4AP20338 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
RAB4AP20338 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.03□□□□□ -0.64
RAB4AP20338 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RAB4AP20338 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.02□□□□□ -0.64
RAB4AP20338 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.02□□□□□ -0.64
RAB4AP20338 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
RAB4AP20338 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.02□□□□□ -0.64
RAB4AP20338 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RAB4AP20338 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 EVL-214ENST00000555048 1715 ntTSL 3 BASIC11.02□□□□□ -0.65
RAB4AP20338 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms