Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
CCL4P13236 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL4P13236 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.36□□□□□ -0.27
CCL4P13236 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 GOLGA2P8-201ENST00000505201 779 ntBASIC13.36□□□□□ -0.27
CCL4P13236 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL4P13236 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CCL4P13236 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.36□□□□□ -0.27
CCL4P13236 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL4P13236 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL4P13236 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CCL4P13236 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL4P13236 AC008972.2-201ENST00000606587 494 ntBASIC13.36□□□□□ -0.27
CCL4P13236 HMGB1P24-201ENST00000611897 328 ntBASIC13.36□□□□□ -0.27
CCL4P13236 MIR6746-201ENST00000620971 63 ntBASIC13.36□□□□□ -0.27
CCL4P13236 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL4P13236 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 AC090505.1-201ENST00000430515 1834 ntBASIC13.36□□□□□ -0.27
CCL4P13236 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL4P13236 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCL4P13236 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 SHMT1P1-201ENST00000419974 1312 ntBASIC13.36□□□□□ -0.27
CCL4P13236 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL4P13236 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCL4P13236 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL4P13236 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL4P13236 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL4P13236 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
CCL4P13236 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCL4P13236 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCL4P13236 AC234644.1-201ENST00000406065 370 ntBASIC13.35□□□□□ -0.27
CCL4P13236 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL4P13236 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.35□□□□□ -0.27
CCL4P13236 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL4P13236 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL4P13236 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.35□□□□□ -0.27
CCL4P13236 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL4P13236 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL4P13236 AC010632.2-201ENST00000588369 1224 ntBASIC13.35□□□□□ -0.27
CCL4P13236 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCL4P13236 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms