Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC172P0C7W6 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC172P0C7W6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC172P0C7W6 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 MIR1202-201ENST00000408529 83 ntBASIC15.57■□□□□ 0.08
CCDC172P0C7W6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 CHMP1AP1-201ENST00000445563 662 ntBASIC15.57■□□□□ 0.08
CCDC172P0C7W6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 C2orf69P2-201ENST00000562032 1123 ntBASIC15.57■□□□□ 0.08
CCDC172P0C7W6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 AC132938.2-201ENST00000579188 680 ntBASIC15.57■□□□□ 0.08
CCDC172P0C7W6 KRT18P8-201ENST00000581937 1246 ntBASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PPY2P-201ENST00000582808 702 ntBASIC15.57■□□□□ 0.08
CCDC172P0C7W6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 AL157996.1-201ENST00000624684 2299 ntBASIC15.57■□□□□ 0.08
CCDC172P0C7W6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC172P0C7W6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AC130686.1-201ENST00000622936 2466 ntBASIC15.56■□□□□ 0.08
CCDC172P0C7W6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 MIR326-201ENST00000362220 95 ntBASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 HOMER2P2-201ENST00000451621 847 ntBASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AC079316.1-201ENST00000548397 411 ntBASIC15.56■□□□□ 0.08
CCDC172P0C7W6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AC021016.3-201ENST00000608367 477 ntBASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.56■□□□□ 0.08
CCDC172P0C7W6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC172P0C7W6 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC172P0C7W6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms