Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 AC026271.4-201ENST00000578214 1833 ntBASIC12.81□□□□□ -0.36
APOA1P02647 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 AL158070.2-201ENST00000623713 1621 ntBASIC12.81□□□□□ -0.36
APOA1P02647 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 AC018445.4-201ENST00000624066 2291 ntBASIC12.81□□□□□ -0.36
APOA1P02647 AC115284.2-201ENST00000624646 2054 ntBASIC12.81□□□□□ -0.36
APOA1P02647 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 YBX2P1-201ENST00000394192 760 ntBASIC12.81□□□□□ -0.36
APOA1P02647 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 ACTG1P14-201ENST00000446382 1122 ntBASIC12.81□□□□□ -0.36
APOA1P02647 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.81□□□□□ -0.36
APOA1P02647 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.81□□□□□ -0.36
APOA1P02647 AC104692.2-201ENST00000603054 253 ntBASIC12.81□□□□□ -0.36
APOA1P02647 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 TUBB8P4-201ENST00000511806 1324 ntBASIC12.81□□□□□ -0.36
APOA1P02647 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
APOA1P02647 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
APOA1P02647 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
APOA1P02647 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
APOA1P02647 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
APOA1P02647 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
APOA1P02647 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 MRPL3P1-201ENST00000400109 1033 ntBASIC12.8□□□□□ -0.36
APOA1P02647 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 GAPDHP40-201ENST00000505218 1006 ntBASIC12.8□□□□□ -0.36
APOA1P02647 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 AL662844.1-201ENST00000546340 181 ntBASIC12.8□□□□□ -0.36
APOA1P02647 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.8□□□□□ -0.36
APOA1P02647 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.8□□□□□ -0.36
APOA1P02647 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
APOA1P02647 PI4KAP2-201ENST00000360806 2080 ntBASIC12.8□□□□□ -0.36
APOA1P02647 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOA1P02647 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.8□□□□□ -0.36
APOA1P02647 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms