Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL161932.2-201ENST00000435436 679 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.73□□□□□ -0.53
SSSCA1O60232 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.73□□□□□ -0.53
SSSCA1O60232 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.73□□□□□ -0.53
SSSCA1O60232 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
SSSCA1O60232 AC027237.1-201ENST00000560942 655 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 AC005586.2-201ENST00000563946 837 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.73□□□□□ -0.53
SSSCA1O60232 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 AC010327.4-202ENST00000591484 748 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.73□□□□□ -0.53
SSSCA1O60232 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.73□□□□□ -0.53
SSSCA1O60232 AL390955.2-201ENST00000603032 514 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SSSCA1O60232 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.73□□□□□ -0.53
SSSCA1O60232 AC100757.3-201ENST00000622361 1406 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.73□□□□□ -0.53
SSSCA1O60232 AC020910.5-201ENST00000623668 1865 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 AL645937.6-201ENST00000641122 3727 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.73□□□□□ -0.53
SSSCA1O60232 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SSSCA1O60232 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SSSCA1O60232 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 MAPK10-262ENST00000641051 5738 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 AL359845.1-201ENST00000458202 1648 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 AC211486.1-202ENST00000416371 468 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 AC107890.1-201ENST00000422478 521 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 AC134915.1-201ENST00000426461 574 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 AK2P2-201ENST00000439142 405 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.72□□□□□ -0.53
SSSCA1O60232 AC211476.1-201ENST00000503899 468 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 AC109322.1-201ENST00000524499 1264 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 AC135586.1-201ENST00000539323 574 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.72□□□□□ -0.53
SSSCA1O60232 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.72□□□□□ -0.53
SSSCA1O60232 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SSSCA1O60232 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.72□□□□□ -0.53
SSSCA1O60232 AC138696.2-201ENST00000607376 223 ntBASIC11.72□□□□□ -0.53
SSSCA1O60232 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.72□□□□□ -0.53
SSSCA1O60232 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SSSCA1O60232 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms