Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC00473A8K010 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC00473A8K010 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 NME2P1-201ENST00000426182 414 ntBASIC11.66□□□□□ -0.54
LINC00473A8K010 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC00473A8K010 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00473A8K010 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC00473A8K010 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.66□□□□□ -0.54
LINC00473A8K010 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.66□□□□□ -0.54
LINC00473A8K010 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC00473A8K010 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.66□□□□□ -0.54
LINC00473A8K010 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC00473A8K010 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00473A8K010 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00473A8K010 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00473A8K010 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00473A8K010 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00473A8K010 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC00473A8K010 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 AL031595.1-201ENST00000623969 4709 ntBASIC11.66□□□□□ -0.54
LINC00473A8K010 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC00473A8K010 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC00473A8K010 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC00473A8K010 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00473A8K010 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00473A8K010 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00473A8K010 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC00473A8K010 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
LINC00473A8K010 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LINC00473A8K010 AC019294.4-201ENST00000561777 2905 ntBASIC11.65□□□□□ -0.54
LINC00473A8K010 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
LINC00473A8K010 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LINC00473A8K010 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
LINC00473A8K010 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00473A8K010 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.65□□□□□ -0.54
LINC00473A8K010 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.65□□□□□ -0.54
LINC00473A8K010 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC00473A8K010 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00473A8K010 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.65□□□□□ -0.54
LINC00473A8K010 KRT18P15-201ENST00000458108 1291 ntBASIC11.65□□□□□ -0.54
LINC00473A8K010 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00473A8K010 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms