Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC104115.1-201ENST00000484005 623 ntBASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 RN7SL47P-201ENST00000488710 299 ntBASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 NDUFB2P1-201ENST00000506966 295 ntBASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC103724.2-201ENST00000520355 476 ntBASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 BX510359.7-201ENST00000619819 630 ntBASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 AC008622.3-201ENST00000621170 600 ntBASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 PES1P2-201ENST00000449745 1735 ntBASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM88BA6NKF7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AL121949.1-201ENST00000402043 968 ntBASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 OR52X1P-201ENST00000446117 914 ntBASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AC009517.1-201ENST00000454750 570 ntBASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AC008021.1-201ENST00000474180 414 ntBASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 RN7SL2-201ENST00000490232 300 ntBASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 FAM213AP2-201ENST00000521579 683 ntBASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 RN7SL4P-201ENST00000584058 295 ntBASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM88BA6NKF7 PTN-202ENST00000393083 1599 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 AC232323.1-201ENST00000540724 2099 ntBASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 KLK8-203ENST00000347619 555 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 SPTLC1P3-201ENST00000403408 259 ntBASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 RBMX2P5-201ENST00000424312 969 ntBASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 AACSP1-202ENST00000521412 1095 ntBASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM88BA6NKF7 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms