Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.63■□□□□ 0.09
CCDC66A2RUB6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AL359711.2-201ENST00000563105 872 ntBASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 MIR6074-201ENST00000612054 107 ntBASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AC008761.3-201ENST00000624803 892 ntBASIC15.63■□□□□ 0.09
CCDC66A2RUB6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AC099521.2-201ENST00000619354 2036 ntBASIC15.63■□□□□ 0.09
CCDC66A2RUB6 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AC011840.2-201ENST00000563063 1520 ntBASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 ACTBP8-201ENST00000403258 1108 ntBASIC15.62■□□□□ 0.09
CCDC66A2RUB6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.62■□□□□ 0.09
CCDC66A2RUB6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 AC092552.1-201ENST00000547243 906 ntBASIC15.62■□□□□ 0.09
CCDC66A2RUB6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 AC012531.1-201ENST00000562848 2680 ntBASIC15.62■□□□□ 0.09
CCDC66A2RUB6 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 RN7SL832P-201ENST00000607781 1756 ntBASIC15.62■□□□□ 0.09
CCDC66A2RUB6 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.62■□□□□ 0.09
CCDC66A2RUB6 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.62■□□□□ 0.09
CCDC66A2RUB6 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC66A2RUB6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 AC020910.6-201ENST00000623084 1459 ntBASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC66A2RUB6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms