Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 MKRN5P-201ENST00000445263 1467 ntBASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 DLX4-206ENST00000611342 1662 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 CNN2P2-201ENST00000443536 909 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 CNN2P3-201ENST00000450201 906 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 RN7SL399P-201ENST00000471648 279 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 AC138761.1-201ENST00000584393 385 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 AL136317.3-201ENST00000618497 906 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KCNIP3Q9Y2W7 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP3Q9Y2W7 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms