Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 INE2-201ENST00000630399 1874 ntBASIC15.18■□□□□ 0.02
CD248Q9HCU0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.18■□□□□ 0.02
CD248Q9HCU0 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 AC005324.6-201ENST00000587972 613 ntBASIC15.18■□□□□ 0.02
CD248Q9HCU0 AC009955.4-201ENST00000597192 544 ntBASIC15.18■□□□□ 0.02
CD248Q9HCU0 AC138696.2-201ENST00000607376 223 ntBASIC15.18■□□□□ 0.02
CD248Q9HCU0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 AL162426.1-201ENST00000624141 743 ntBASIC15.18■□□□□ 0.02
CD248Q9HCU0 AC018529.2-202ENST00000611482 3087 ntBASIC15.18■□□□□ 0.02
CD248Q9HCU0 KRT8P29-201ENST00000420409 1371 ntBASIC15.18■□□□□ 0.02
CD248Q9HCU0 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CD248Q9HCU0 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CD248Q9HCU0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 AC009093.2-202ENST00000620513 2079 ntBASIC15.17■□□□□ 0.02
CD248Q9HCU0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 UPF3AP2-201ENST00000457924 1132 ntBASIC15.17■□□□□ 0.02
CD248Q9HCU0 RN7SL769P-201ENST00000469386 295 ntBASIC15.17■□□□□ 0.02
CD248Q9HCU0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 AC079328.1-201ENST00000560358 952 ntBASIC15.17■□□□□ 0.02
CD248Q9HCU0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 AL023803.2-201ENST00000620080 638 ntBASIC15.17■□□□□ 0.02
CD248Q9HCU0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms