Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 PCDHA6-201ENST00000378126 3267 ntBASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 MKRN5P-201ENST00000445263 1467 ntBASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 AC092658.1-201ENST00000505836 891 ntBASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 AC106820.3-201ENST00000561653 397 ntBASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
AMBRA1Q9C0C7 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 BOLA2P3-201ENST00000404566 256 ntBASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 KRT43P-201ENST00000434019 910 ntBASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 KRT17P8-201ENST00000540749 863 ntBASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.44□□□□□ -0.26
AMBRA1Q9C0C7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms