Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL19Q99731 AC092573.1-201ENST00000433054 884 ntBASIC11.99□□□□□ -0.49
CCL19Q99731 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL19Q99731 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC11.99□□□□□ -0.49
CCL19Q99731 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 AC026470.1-201ENST00000478038 846 ntBASIC11.99□□□□□ -0.49
CCL19Q99731 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC11.99□□□□□ -0.49
CCL19Q99731 OR2A1-AS1-210ENST00000496968 531 ntBASIC11.99□□□□□ -0.49
CCL19Q99731 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC11.99□□□□□ -0.49
CCL19Q99731 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL19Q99731 COX5A-205ENST00000568517 582 ntTSL 3 BASIC11.99□□□□□ -0.49
CCL19Q99731 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL19Q99731 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL19Q99731 AC006548.2-201ENST00000605217 529 ntBASIC11.99□□□□□ -0.49
CCL19Q99731 AC104506.1-201ENST00000609247 429 ntBASIC11.99□□□□□ -0.49
CCL19Q99731 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
CCL19Q99731 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL19Q99731 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.99□□□□□ -0.49
CCL19Q99731 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CCL19Q99731 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 DBET-201ENST00000630918 3363 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CCL19Q99731 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 KRT18P46-201ENST00000435568 1279 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 KRT18P62-201ENST00000446618 1287 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC11.98□□□□□ -0.49
CCL19Q99731 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC11.98□□□□□ -0.49
CCL19Q99731 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 PRSS3P1-201ENST00000503996 742 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 AC093826.1-201ENST00000508655 993 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CCL19Q99731 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 AL512310.5-201ENST00000551999 515 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC11.98□□□□□ -0.49
CCL19Q99731 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 AL160191.2-201ENST00000603975 601 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 AP003392.6-201ENST00000607709 325 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 MIR6074-201ENST00000612054 107 ntBASIC11.98□□□□□ -0.49
CCL19Q99731 HPX-213ENST00000615166 826 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC11.98□□□□□ -0.49
CCL19Q99731 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.98□□□□□ -0.49
CCL19Q99731 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CCL19Q99731 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms