Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
IFT140Q96RY7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC22.67■■□□□ 1.22
IFT140Q96RY7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
IFT140Q96RY7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
IFT140Q96RY7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC22.67■■□□□ 1.22
IFT140Q96RY7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
IFT140Q96RY7 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
IFT140Q96RY7 CA6-205ENST00000480186 1493 ntTSL 2 BASIC22.67■■□□□ 1.22
IFT140Q96RY7 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
IFT140Q96RY7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC22.67■■□□□ 1.22
IFT140Q96RY7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
IFT140Q96RY7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
IFT140Q96RY7 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
IFT140Q96RY7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC22.67■■□□□ 1.22
IFT140Q96RY7 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 PGAM1P10-201ENST00000402426 761 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 PRDX3P2-201ENST00000447051 611 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 RN7SL76P-201ENST00000482435 289 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 RN7SL452P-201ENST00000482923 291 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 AC244097.1-201ENST00000621631 1216 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 TBC1D3P1-201ENST00000590047 1693 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 KRT8P24-201ENST00000560290 1559 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 AC069061.4-201ENST00000581294 1347 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 OR52X1P-201ENST00000446117 914 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 AC005011.1-201ENST00000455206 210 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
IFT140Q96RY7 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 PMM2-216ENST00000569958 698 ntTSL 2 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 AC211476.2-201ENST00000608799 708 ntBASIC22.66■■□□□ 1.22
IFT140Q96RY7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
IFT140Q96RY7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 DOC2GP-204ENST00000639052 2548 ntBASIC22.65■■□□□ 1.22
IFT140Q96RY7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 AL356653.1-201ENST00000402743 360 ntBASIC22.65■■□□□ 1.22
IFT140Q96RY7 AL391903.1-201ENST00000407513 365 ntBASIC22.65■■□□□ 1.22
IFT140Q96RY7 AC138392.1-201ENST00000427577 921 ntBASIC22.65■■□□□ 1.22
IFT140Q96RY7 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 AC010395.2-201ENST00000509899 904 ntBASIC22.65■■□□□ 1.22
IFT140Q96RY7 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 FAM213AP2-201ENST00000521579 683 ntBASIC22.65■■□□□ 1.22
IFT140Q96RY7 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 MIR4459-201ENST00000581837 66 ntBASIC22.65■■□□□ 1.22
IFT140Q96RY7 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
IFT140Q96RY7 AC006486.2-201ENST00000624246 2199 ntBASIC22.65■■□□□ 1.22
IFT140Q96RY7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC22.65■■□□□ 1.22
IFT140Q96RY7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
IFT140Q96RY7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC22.64■■□□□ 1.22
IFT140Q96RY7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
IFT140Q96RY7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
IFT140Q96RY7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
IFT140Q96RY7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
IFT140Q96RY7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
IFT140Q96RY7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
IFT140Q96RY7 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms