Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 POM121L14P-201ENST00000406100 1558 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 DLX4-206ENST00000611342 1662 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 AC114812.1-204ENST00000449669 728 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 CHCHD2P3-201ENST00000603038 451 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 AC099568.2-201ENST00000609194 695 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 AC005252.2-201ENST00000624630 1141 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
RFT1Q96AA3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RFT1Q96AA3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RFT1Q96AA3 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.77□□□□□ -0.36
RFT1Q96AA3 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
RFT1Q96AA3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
RFT1Q96AA3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RFT1Q96AA3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 PMS2P2-201ENST00000425039 1128 ntBASIC12.77□□□□□ -0.37
RFT1Q96AA3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 SPTLC1P1-201ENST00000447199 261 ntBASIC12.77□□□□□ -0.37
RFT1Q96AA3 MYCLP2-201ENST00000449268 967 ntBASIC12.77□□□□□ -0.37
RFT1Q96AA3 FO681548.1-201ENST00000455617 1132 ntBASIC12.77□□□□□ -0.37
RFT1Q96AA3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
RFT1Q96AA3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 AC004233.3-201ENST00000607794 1269 ntBASIC12.77□□□□□ -0.37
RFT1Q96AA3 AC006538.3-201ENST00000612495 578 ntBASIC12.77□□□□□ -0.37
RFT1Q96AA3 AC009118.2-201ENST00000613275 655 ntBASIC12.77□□□□□ -0.37
RFT1Q96AA3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RFT1Q96AA3 KRT8P35-201ENST00000483942 1338 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms