Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 AL008707.1-201ENST00000422498 534 ntBASIC12.57□□□□□ -0.4
TMEM54Q969K7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 ZNF767P-206ENST00000513792 565 ntBASIC12.57□□□□□ -0.4
TMEM54Q969K7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 AC020914.3-201ENST00000594712 304 ntBASIC12.57□□□□□ -0.4
TMEM54Q969K7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 AC100757.4-201ENST00000626934 759 ntBASIC12.57□□□□□ -0.4
TMEM54Q969K7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 AL157791.1-201ENST00000553667 1699 ntBASIC12.57□□□□□ -0.4
TMEM54Q969K7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM54Q969K7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM54Q969K7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 AC239868.1-201ENST00000369385 493 ntBASIC12.56□□□□□ -0.4
TMEM54Q969K7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 DUX4L50-201ENST00000455245 715 ntBASIC12.56□□□□□ -0.4
TMEM54Q969K7 KRT8P13-201ENST00000463294 1010 ntBASIC12.56□□□□□ -0.4
TMEM54Q969K7 CHCHD2P2-201ENST00000503744 321 ntBASIC12.56□□□□□ -0.4
TMEM54Q969K7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 AC130686.1-201ENST00000622936 2466 ntBASIC12.56□□□□□ -0.4
TMEM54Q969K7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 AL139158.3-201ENST00000641212 1562 ntBASIC12.56□□□□□ -0.4
TMEM54Q969K7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TMEM54Q969K7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM54Q969K7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.55□□□□□ -0.4
TMEM54Q969K7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.55□□□□□ -0.4
TMEM54Q969K7 AC138028.6-201ENST00000616106 1482 ntBASIC12.55□□□□□ -0.4
TMEM54Q969K7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM54Q969K7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms