Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC093813.1-201ENST00000605066 256 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 MIR6080-201ENST00000617359 66 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 AC015819.3-201ENST00000624305 2674 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 AC022400.8-201ENST00000623453 3599 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.65□□□□□ -0.38
AP3S1Q92572 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.65□□□□□ -0.38
AP3S1Q92572 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
AP3S1Q92572 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.65□□□□□ -0.38
AP3S1Q92572 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.65□□□□□ -0.38
AP3S1Q92572 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.65□□□□□ -0.38
AP3S1Q92572 GIMAP3P-201ENST00000495150 836 ntBASIC12.65□□□□□ -0.38
AP3S1Q92572 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 AC051619.7-201ENST00000568314 623 ntBASIC12.65□□□□□ -0.38
AP3S1Q92572 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
AP3S1Q92572 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 MIR4453-201ENST00000584019 89 ntBASIC12.65□□□□□ -0.38
AP3S1Q92572 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 AL158212.4-201ENST00000624062 1286 ntBASIC12.65□□□□□ -0.38
AP3S1Q92572 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.65□□□□□ -0.38
AP3S1Q92572 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
AP3S1Q92572 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
AP3S1Q92572 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.65□□□□□ -0.39
AP3S1Q92572 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.65□□□□□ -0.39
AP3S1Q92572 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
AP3S1Q92572 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.64□□□□□ -0.39
AP3S1Q92572 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.64□□□□□ -0.39
AP3S1Q92572 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.64□□□□□ -0.39
AP3S1Q92572 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AP3S1Q92572 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AP3S1Q92572 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.64□□□□□ -0.39
AP3S1Q92572 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AP3S1Q92572 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP3S1Q92572 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms