Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.49□□□□□ -0.41
CCDC107Q8WV48 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 EIF3FP3-201ENST00000434851 1086 ntBASIC12.49□□□□□ -0.41
CCDC107Q8WV48 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 AP005019.2-201ENST00000615104 511 ntBASIC12.49□□□□□ -0.41
CCDC107Q8WV48 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 KHSRPP1-201ENST00000427983 1768 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AGAP10P-201ENST00000454844 2418 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AP002761.4-201ENST00000565433 3361 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AL136172.1-201ENST00000598590 1394 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AC007969.1-201ENST00000433675 447 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 FO681548.1-201ENST00000455617 1132 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 ELK1P1-201ENST00000485699 580 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 GIMAP3P-201ENST00000495150 836 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 KRT18P25-201ENST00000508931 1278 ntBASIC12.48□□□□□ -0.41
CCDC107Q8WV48 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.48□□□□□ -0.41
CCDC107Q8WV48 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms