Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 MIR766-201ENST00000390223 111 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 HNRNPA1P59-201ENST00000430583 918 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AL133551.1-201ENST00000610279 1222 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC148476.1-201ENST00000622182 705 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC073347.1-201ENST00000421633 2643 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 KRT18P45-201ENST00000515347 1333 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 HMGN1P4-201ENST00000419500 290 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 PLAC9P1-203ENST00000440031 223 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AC022382.1-201ENST00000602768 336 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 SNORA50D-202ENST00000627561 132 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AC099063.4-201ENST00000641099 1602 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 SERPINB8P1-201ENST00000401898 377 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 RPL13AP5-201ENST00000439189 612 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 RN7SL646P-201ENST00000492969 297 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AC239600.1-201ENST00000603201 462 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 MIR6871-201ENST00000613433 56 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AL109954.3-201ENST00000615088 558 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AC090505.1-201ENST00000430515 1834 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 RCC2P5-201ENST00000492126 1487 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 PMF1-201ENST00000368273 884 ntTSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AC006273.1-201ENST00000606966 861 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
ALMS1Q8TCU4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 AC138392.1-201ENST00000427577 921 ntBASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 AACSP1-202ENST00000521412 1095 ntBASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms