Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 FRMPD2B-201ENST00000431305 1347 ntBASIC13.75□□□□□ -0.21
RNF44Q7L0R7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 Z97180.1-201ENST00000445173 988 ntBASIC13.75□□□□□ -0.21
RNF44Q7L0R7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 AL022334.2-201ENST00000610000 484 ntBASIC13.75□□□□□ -0.21
RNF44Q7L0R7 MEG3_2.1-201ENST00000611456 105 ntBASIC13.75□□□□□ -0.21
RNF44Q7L0R7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 CCT8L1P-201ENST00000465400 1674 ntBASIC13.75□□□□□ -0.21
RNF44Q7L0R7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 AC026748.1-201ENST00000624349 3251 ntBASIC13.75□□□□□ -0.21
RNF44Q7L0R7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.75□□□□□ -0.21
RNF44Q7L0R7 HSPA8P5-201ENST00000456928 2069 ntBASIC13.75□□□□□ -0.21
RNF44Q7L0R7 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 TUBB8P4-201ENST00000511806 1324 ntBASIC13.74□□□□□ -0.21
RNF44Q7L0R7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 SLC25A24P2-201ENST00000415059 510 ntBASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC093752.3-201ENST00000567343 901 ntBASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AC091812.3-201ENST00000621362 345 ntBASIC13.74□□□□□ -0.21
RNF44Q7L0R7 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms