Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 AC104073.2-201ENST00000453737 312 ntBASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 SCARNA20.5-201ENST00000516991 142 ntBASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 AC003686.1-201ENST00000550956 1034 ntBASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 AC009779.1-201ENST00000551138 283 ntBASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 SNORD3B-2-202ENST00000571722 791 ntBASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 AC020910.6-201ENST00000623084 1459 ntBASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC144NLQ6NUI1 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 CYP4F23P-201ENST00000593402 1579 ntBASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 TUBB8P4-201ENST00000511806 1324 ntBASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC136759.1-202ENST00000530858 2194 ntBASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC018629.1-201ENST00000623381 1736 ntBASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC044849.1-201ENST00000519737 1188 ntBASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC144NLQ6NUI1 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms