Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 MED15P3-201ENST00000413613 326 ntBASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 AC105443.1-201ENST00000433754 712 ntBASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 GYG1-209ENST00000483267 801 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 RN7SL480P-201ENST00000581481 294 ntBASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 RBM14-205ENST00000443702 732 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC104115.1-201ENST00000484005 623 ntBASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AL450346.2-201ENST00000495602 1024 ntBASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC026412.1-206ENST00000502273 206 ntBASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 PXK-210ENST00000479241 2817 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 NEMF-210ENST00000556672 590 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 RNASEH2CP1-201ENST00000454281 502 ntBASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VPS13DQ5THJ4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 BICD1P1-201ENST00000457832 1222 ntBASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 TMA16-204ENST00000508268 608 ntTSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ISL1-203ENST00000511384 981 ntTSL 5 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13DQ5THJ4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms