Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 DUX4L50-201ENST00000455245 715 ntBASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 HIST2H2BC-201ENST00000498492 580 ntBASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 GOLGA2P8-201ENST00000505201 779 ntBASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 AC090857.1-201ENST00000527400 390 ntBASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 AC091544.8-201ENST00000619490 361 ntBASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 GPR182-203ENST00000622922 591 ntBASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 FRMPD2B-201ENST00000431305 1347 ntBASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 RCC2P1-201ENST00000452257 1476 ntBASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PRICKLE4Q2TBC4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PRICKLE4Q2TBC4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 ACTG1P2-201ENST00000415776 1125 ntBASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 ACTG1P11-201ENST00000425411 1125 ntBASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 SPTLC1P5-201ENST00000450718 252 ntBASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 MEG3_2.1-201ENST00000611456 105 ntBASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.27□□□□□ -0.29
PRICKLE4Q2TBC4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms