Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.52□□□□□ -0.4
HIST1H3AP68431 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.52□□□□□ -0.4
HIST1H3AP68431 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.52□□□□□ -0.4
HIST1H3AP68431 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HIST1H3AP68431 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 AC072061.1-201ENST00000569710 2234 ntBASIC12.52□□□□□ -0.41
HIST1H3AP68431 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 AC078875.1-201ENST00000431907 724 ntBASIC12.52□□□□□ -0.41
HIST1H3AP68431 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 AC092299.1-201ENST00000632679 757 ntBASIC12.52□□□□□ -0.41
HIST1H3AP68431 AC004923.1-202ENST00000642106 209 ntBASIC12.52□□□□□ -0.41
HIST1H3AP68431 CICP20-201ENST00000443330 2801 ntBASIC12.52□□□□□ -0.41
HIST1H3AP68431 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 TUBB1P2-201ENST00000422712 1306 ntBASIC12.52□□□□□ -0.41
HIST1H3AP68431 TUBB1P1-201ENST00000503144 1300 ntBASIC12.52□□□□□ -0.41
HIST1H3AP68431 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HIST1H3AP68431 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HIST1H3AP68431 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 DPM3-202ENST00000368399 517 ntBASIC12.51□□□□□ -0.41
HIST1H3AP68431 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms