Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.18□□□□□ -0.78
RPL39P62891 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 AC097493.3-201ENST00000509725 367 ntBASIC10.18□□□□□ -0.78
RPL39P62891 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.18□□□□□ -0.78
RPL39P62891 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.18□□□□□ -0.78
RPL39P62891 AC009407.1-201ENST00000568958 598 ntBASIC10.18□□□□□ -0.78
RPL39P62891 KRT18P8-201ENST00000581937 1246 ntBASIC10.18□□□□□ -0.78
RPL39P62891 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.18□□□□□ -0.78
RPL39P62891 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 BRI3BPP1-201ENST00000594224 787 ntBASIC10.18□□□□□ -0.78
RPL39P62891 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC10.18□□□□□ -0.78
RPL39P62891 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.18□□□□□ -0.78
RPL39P62891 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.18□□□□□ -0.78
RPL39P62891 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 AL355102.3-201ENST00000554299 1678 ntBASIC10.18□□□□□ -0.78
RPL39P62891 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.18□□□□□ -0.78
RPL39P62891 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RPL39P62891 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
RPL39P62891 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC10.17□□□□□ -0.78
RPL39P62891 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.17□□□□□ -0.78
RPL39P62891 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC10.17□□□□□ -0.78
RPL39P62891 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC10.17□□□□□ -0.78
RPL39P62891 DDC-214ENST00000622873 1839 ntTSL 3 BASIC10.17□□□□□ -0.78
RPL39P62891 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.17□□□□□ -0.78
RPL39P62891 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC10.17□□□□□ -0.78
RPL39P62891 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.17□□□□□ -0.78
RPL39P62891 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC10.17□□□□□ -0.78
RPL39P62891 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
RPL39P62891 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
RPL39P62891 RPSAP43-201ENST00000402237 625 ntBASIC10.17□□□□□ -0.78
RPL39P62891 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.17□□□□□ -0.78
RPL39P62891 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC10.17□□□□□ -0.78
RPL39P62891 AC009477.1-201ENST00000452936 217 ntBASIC10.17□□□□□ -0.78
RPL39P62891 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.17□□□□□ -0.78
RPL39P62891 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
RPL39P62891 TPRX2P-201ENST00000535362 881 ntBASIC10.17□□□□□ -0.78
RPL39P62891 STOM-203ENST00000538954 1257 ntTSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.17□□□□□ -0.78
RPL39P62891 AC023310.3-201ENST00000557027 670 ntBASIC10.17□□□□□ -0.78
RPL39P62891 AC027237.1-201ENST00000560942 655 ntBASIC10.17□□□□□ -0.78
RPL39P62891 AC100756.1-201ENST00000562736 682 ntBASIC10.17□□□□□ -0.78
RPL39P62891 AC138749.3-201ENST00000567691 622 ntBASIC10.17□□□□□ -0.78
RPL39P62891 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
RPL39P62891 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 AC138696.2-201ENST00000607376 223 ntBASIC10.17□□□□□ -0.78
RPL39P62891 AC116165.1-201ENST00000611806 668 ntBASIC10.17□□□□□ -0.78
RPL39P62891 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 AC004840.1-201ENST00000636359 365 ntBASIC10.17□□□□□ -0.78
RPL39P62891 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.17□□□□□ -0.78
RPL39P62891 DLX4-206ENST00000611342 1662 ntBASIC10.17□□□□□ -0.78
RPL39P62891 PCDHB19P-202ENST00000625133 2914 ntBASIC10.17□□□□□ -0.78
RPL39P62891 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.17□□□□□ -0.78
RPL39P62891 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RPL39P62891 AC022497.1-201ENST00000624916 3691 ntBASIC10.17□□□□□ -0.78
RPL39P62891 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms