Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCR9P51686 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 MEX3B-202ENST00000558133 4333 ntBASIC12.67□□□□□ -0.38
CCR9P51686 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CCR9P51686 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CCR9P51686 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.67□□□□□ -0.38
CCR9P51686 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.67□□□□□ -0.38
CCR9P51686 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.67□□□□□ -0.38
CCR9P51686 AC140912.1-201ENST00000577171 1054 ntBASIC12.67□□□□□ -0.38
CCR9P51686 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.67□□□□□ -0.38
CCR9P51686 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.67□□□□□ -0.38
CCR9P51686 AJ011932.1-201ENST00000621707 465 ntBASIC12.67□□□□□ -0.38
CCR9P51686 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.67□□□□□ -0.38
CCR9P51686 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCR9P51686 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCR9P51686 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.66□□□□□ -0.38
CCR9P51686 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
CCR9P51686 CD8B2-202ENST00000417670 633 ntBASIC12.66□□□□□ -0.38
CCR9P51686 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.66□□□□□ -0.38
CCR9P51686 TSPY16P-201ENST00000449843 468 ntBASIC12.66□□□□□ -0.38
CCR9P51686 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.66□□□□□ -0.38
CCR9P51686 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.66□□□□□ -0.38
CCR9P51686 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.66□□□□□ -0.38
CCR9P51686 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.66□□□□□ -0.38
CCR9P51686 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 AC025279.2-201ENST00000569730 653 ntBASIC12.66□□□□□ -0.38
CCR9P51686 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.66□□□□□ -0.38
CCR9P51686 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.66□□□□□ -0.38
CCR9P51686 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CCR9P51686 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
CCR9P51686 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCR9P51686 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCR9P51686 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCR9P51686 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
CCR9P51686 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCR9P51686 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CCR9P51686 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCR9P51686 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCR9P51686 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCR9P51686 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCR9P51686 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCR9P51686 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCR9P51686 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCR9P51686 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms