Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC004837.1-201ENST00000446267 564 ntBASIC20.72■□□□□ 0.91
HFM1A2PYH4 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 AC138466.5-201ENST00000624002 808 ntBASIC20.72■□□□□ 0.91
HFM1A2PYH4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 AF013593.1-201ENST00000458074 1487 ntBASIC20.72■□□□□ 0.91
HFM1A2PYH4 MARK2P9-201ENST00000430958 1727 ntBASIC20.72■□□□□ 0.91
HFM1A2PYH4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 AC245140.2-201ENST00000624054 1939 ntBASIC20.72■□□□□ 0.91
HFM1A2PYH4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 RPL35P9-201ENST00000446059 350 ntBASIC20.71■□□□□ 0.91
HFM1A2PYH4 RN7SL375P-201ENST00000492442 298 ntBASIC20.71■□□□□ 0.91
HFM1A2PYH4 LINC00634-202ENST00000505157 222 ntBASIC20.71■□□□□ 0.91
HFM1A2PYH4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 LINC01230-201ENST00000625222 3017 ntBASIC20.71■□□□□ 0.91
HFM1A2PYH4 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HFM1A2PYH4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
HFM1A2PYH4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HFM1A2PYH4 RCC2P5-201ENST00000492126 1487 ntBASIC20.7■□□□□ 0.9
HFM1A2PYH4 AC108734.2-201ENST00000420887 1069 ntBASIC20.7■□□□□ 0.9
HFM1A2PYH4 AC226150.1-201ENST00000544259 466 ntBASIC20.7■□□□□ 0.9
HFM1A2PYH4 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 AL118522.1-201ENST00000611368 560 ntBASIC20.7■□□□□ 0.9
HFM1A2PYH4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HFM1A2PYH4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.7■□□□□ 0.9
HFM1A2PYH4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms