Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC35.25■■■■□ 3.23
CDK11AQ9UQ88 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC35.25■■■■□ 3.23
CDK11AQ9UQ88 NME4-211ENST00000620944 1193 ntTSL 2 BASIC35.25■■■■□ 3.23
CDK11AQ9UQ88 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC35.25■■■■□ 3.23
CDK11AQ9UQ88 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC35.24■■■■□ 3.23
CDK11AQ9UQ88 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC35.24■■■■□ 3.23
CDK11AQ9UQ88 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC35.24■■■■□ 3.23
CDK11AQ9UQ88 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CDK11AQ9UQ88 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC35.24■■■■□ 3.23
CDK11AQ9UQ88 AL358852.1-201ENST00000623174 1268 ntBASIC35.24■■■■□ 3.23
CDK11AQ9UQ88 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC35.24■■■■□ 3.23
CDK11AQ9UQ88 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CDK11AQ9UQ88 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC35.23■■■■□ 3.23
CDK11AQ9UQ88 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC35.23■■■■□ 3.23
CDK11AQ9UQ88 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC35.23■■■■□ 3.23
CDK11AQ9UQ88 EI24-204ENST00000527235 1625 ntTSL 5 BASIC35.22■■■■□ 3.23
CDK11AQ9UQ88 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
CDK11AQ9UQ88 HACD1-201ENST00000326961 773 ntTSL 2 BASIC35.22■■■■□ 3.23
CDK11AQ9UQ88 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC35.22■■■■□ 3.23
CDK11AQ9UQ88 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC35.22■■■■□ 3.23
CDK11AQ9UQ88 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC35.22■■■■□ 3.23
CDK11AQ9UQ88 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC35.22■■■■□ 3.23
CDK11AQ9UQ88 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC35.21■■■■□ 3.23
CDK11AQ9UQ88 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC35.21■■■■□ 3.23
CDK11AQ9UQ88 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CDK11AQ9UQ88 AC027612.3-201ENST00000413684 1047 ntBASIC35.21■■■■□ 3.23
CDK11AQ9UQ88 IGHV3-19-201ENST00000521488 291 ntBASIC35.21■■■■□ 3.23
CDK11AQ9UQ88 AL031602.1-201ENST00000633169 911 ntBASIC35.21■■■■□ 3.23
CDK11AQ9UQ88 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
CDK11AQ9UQ88 KRT18P5-201ENST00000436075 1291 ntBASIC35.2■■■■□ 3.23
CDK11AQ9UQ88 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CDK11AQ9UQ88 AC022517.1-201ENST00000592429 346 ntBASIC35.2■■■■□ 3.23
CDK11AQ9UQ88 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC35.2■■■■□ 3.23
CDK11AQ9UQ88 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
CDK11AQ9UQ88 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.22
CDK11AQ9UQ88 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC35.2■■■■□ 3.22
CDK11AQ9UQ88 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CDK11AQ9UQ88 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CDK11AQ9UQ88 AC123595.1-201ENST00000440769 1046 ntBASIC35.19■■■■□ 3.22
CDK11AQ9UQ88 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC35.19■■■■□ 3.22
CDK11AQ9UQ88 RAB43-208ENST00000615093 783 ntTSL 5 BASIC35.19■■■■□ 3.22
CDK11AQ9UQ88 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC35.19■■■■□ 3.22
CDK11AQ9UQ88 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC35.18■■■■□ 3.22
CDK11AQ9UQ88 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
CDK11AQ9UQ88 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CDK11AQ9UQ88 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CDK11AQ9UQ88 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC35.18■■■■□ 3.22
CDK11AQ9UQ88 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC35.17■■■■□ 3.22
CDK11AQ9UQ88 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC35.17■■■■□ 3.22
CDK11AQ9UQ88 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC35.17■■■■□ 3.22
CDK11AQ9UQ88 MIR572-201ENST00000384983 95 ntBASIC35.17■■■■□ 3.22
CDK11AQ9UQ88 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC35.17■■■■□ 3.22
CDK11AQ9UQ88 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CDK11AQ9UQ88 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC35.17■■■■□ 3.22
CDK11AQ9UQ88 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC35.17■■■■□ 3.22
CDK11AQ9UQ88 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 DUX4L2-201ENST00000561772 1275 ntBASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 DUX4L6-201ENST00000626483 1275 ntBASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 DUX4L1-201ENST00000627662 1275 ntBASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 DUX4L8-201ENST00000629013 1275 ntBASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 DUX4L3-201ENST00000630187 1275 ntBASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 DUX4L7-201ENST00000630678 1275 ntBASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 DUX4L5-201ENST00000630834 1275 ntBASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 RARRES2P11-201ENST00000635158 484 ntBASIC35.16■■■■□ 3.22
CDK11AQ9UQ88 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC35.15■■■■□ 3.22
CDK11AQ9UQ88 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC35.14■■■■□ 3.22
CDK11AQ9UQ88 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CDK11AQ9UQ88 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CDK11AQ9UQ88 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CDK11AQ9UQ88 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC35.14■■■■□ 3.22
CDK11AQ9UQ88 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC35.14■■■■□ 3.22
CDK11AQ9UQ88 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 IKBKGP1-201ENST00000612193 1073 ntBASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC35.13■■■■□ 3.21
CDK11AQ9UQ88 AC133637.1-201ENST00000624115 1537 ntBASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC35.12■■■■□ 3.21
CDK11AQ9UQ88 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC35.12■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms