Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 C1orf229-201ENST00000623686 2258 ntBASIC21.02■□□□□ 0.96
RLIMQ9NVW2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.02■□□□□ 0.96
RLIMQ9NVW2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RLIMQ9NVW2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
RLIMQ9NVW2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RLIMQ9NVW2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 DUSP8P3-201ENST00000399571 1760 ntBASIC21.01■□□□□ 0.95
RLIMQ9NVW2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.01■□□□□ 0.95
RLIMQ9NVW2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21■□□□□ 0.95
RLIMQ9NVW2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RLIMQ9NVW2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RLIMQ9NVW2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21■□□□□ 0.95
RLIMQ9NVW2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21■□□□□ 0.95
RLIMQ9NVW2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21■□□□□ 0.95
RLIMQ9NVW2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RLIMQ9NVW2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RLIMQ9NVW2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RLIMQ9NVW2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21■□□□□ 0.95
RLIMQ9NVW2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RLIMQ9NVW2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 ALDH1A3-203ENST00000557963 1670 ntBASIC20.99■□□□□ 0.95
RLIMQ9NVW2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 AC092068.2-201ENST00000590491 1708 ntBASIC20.99■□□□□ 0.95
RLIMQ9NVW2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.99■□□□□ 0.95
RLIMQ9NVW2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.98■□□□□ 0.95
RLIMQ9NVW2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.98■□□□□ 0.95
RLIMQ9NVW2 AC103724.3-201ENST00000564481 992 ntBASIC20.98■□□□□ 0.95
RLIMQ9NVW2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RLIMQ9NVW2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RLIMQ9NVW2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 YBX1P4-201ENST00000392794 808 ntBASIC20.97■□□□□ 0.95
RLIMQ9NVW2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.97■□□□□ 0.95
RLIMQ9NVW2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RLIMQ9NVW2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
RLIMQ9NVW2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RLIMQ9NVW2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RLIMQ9NVW2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RLIMQ9NVW2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RLIMQ9NVW2 LINC00565-201ENST00000562710 2331 ntBASIC20.95■□□□□ 0.94
RLIMQ9NVW2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RLIMQ9NVW2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RLIMQ9NVW2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.94■□□□□ 0.94
RLIMQ9NVW2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms