Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 FOXO3B-201ENST00000395675 1928 ntBASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 DUX4L28-201ENST00000623687 678 ntBASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 WWC2-AS2-201ENST00000578387 2183 ntBASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 MIR219A2-201ENST00000608502 1504 ntBASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ECEL1P1-201ENST00000373592 1742 ntBASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 ANOS2P-203ENST00000472227 1816 ntBASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LCE3DQ9BYE3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 DUSP8P3-201ENST00000399571 1760 ntBASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
LCE3DQ9BYE3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms