Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.85■■■□□ 2.85
SCAF11Q99590 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC32.84■■■□□ 2.85
SCAF11Q99590 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
SCAF11Q99590 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SCAF11Q99590 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
SCAF11Q99590 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC32.84■■■□□ 2.85
SCAF11Q99590 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC32.84■■■□□ 2.85
SCAF11Q99590 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
SCAF11Q99590 AICDA-202ENST00000537228 667 ntTSL 5 BASIC32.83■■■□□ 2.85
SCAF11Q99590 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC32.83■■■□□ 2.85
SCAF11Q99590 MIR6084-201ENST00000622012 110 ntBASIC32.83■■■□□ 2.85
SCAF11Q99590 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
SCAF11Q99590 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SCAF11Q99590 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
SCAF11Q99590 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SCAF11Q99590 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC32.82■■■□□ 2.84
SCAF11Q99590 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SCAF11Q99590 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SCAF11Q99590 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SCAF11Q99590 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC32.81■■■□□ 2.84
SCAF11Q99590 VGF-203ENST00000611537 1622 ntTSL 5 BASIC32.81■■■□□ 2.84
SCAF11Q99590 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SCAF11Q99590 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SCAF11Q99590 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC32.8■■■□□ 2.84
SCAF11Q99590 IGHV3-19-201ENST00000521488 291 ntBASIC32.8■■■□□ 2.84
SCAF11Q99590 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
SCAF11Q99590 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
SCAF11Q99590 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC32.8■■■□□ 2.84
SCAF11Q99590 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC32.8■■■□□ 2.84
SCAF11Q99590 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC32.8■■■□□ 2.84
SCAF11Q99590 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SCAF11Q99590 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC32.79■■■□□ 2.84
SCAF11Q99590 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SCAF11Q99590 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SCAF11Q99590 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SCAF11Q99590 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
SCAF11Q99590 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC32.79■■■□□ 2.84
SCAF11Q99590 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC32.78■■■□□ 2.84
SCAF11Q99590 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC32.78■■■□□ 2.84
SCAF11Q99590 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC32.78■■■□□ 2.84
SCAF11Q99590 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.78■■■□□ 2.84
SCAF11Q99590 NKILA-201ENST00000613231 537 ntTSL 4 BASIC32.78■■■□□ 2.84
SCAF11Q99590 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
SCAF11Q99590 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC32.78■■■□□ 2.84
SCAF11Q99590 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SCAF11Q99590 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SCAF11Q99590 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SCAF11Q99590 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
SCAF11Q99590 MIR572-201ENST00000384983 95 ntBASIC32.77■■■□□ 2.84
SCAF11Q99590 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC32.77■■■□□ 2.84
SCAF11Q99590 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
SCAF11Q99590 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
SCAF11Q99590 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC32.77■■■□□ 2.84
SCAF11Q99590 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.84
SCAF11Q99590 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
SCAF11Q99590 TERF1P2-201ENST00000583350 1212 ntBASIC32.76■■■□□ 2.84
SCAF11Q99590 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC32.76■■■□□ 2.84
SCAF11Q99590 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC32.76■■■□□ 2.84
SCAF11Q99590 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.83
SCAF11Q99590 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
SCAF11Q99590 KRT18P14-201ENST00000534205 1250 ntBASIC32.75■■■□□ 2.83
SCAF11Q99590 AL354811.1-201ENST00000610286 706 ntBASIC32.75■■■□□ 2.83
SCAF11Q99590 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SCAF11Q99590 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
SCAF11Q99590 GXYLT1P2-201ENST00000433312 1230 ntBASIC32.74■■■□□ 2.83
SCAF11Q99590 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
SCAF11Q99590 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
SCAF11Q99590 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
SCAF11Q99590 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC32.74■■■□□ 2.83
SCAF11Q99590 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC32.74■■■□□ 2.83
SCAF11Q99590 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
SCAF11Q99590 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.73■■■□□ 2.83
SCAF11Q99590 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SCAF11Q99590 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
SCAF11Q99590 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.73■■■□□ 2.83
SCAF11Q99590 pRNA.6-201ENST00000610482 90 ntBASIC32.73■■■□□ 2.83
SCAF11Q99590 pRNA.5-201ENST00000612139 90 ntBASIC32.73■■■□□ 2.83
SCAF11Q99590 pRNA.11-201ENST00000618423 90 ntBASIC32.73■■■□□ 2.83
SCAF11Q99590 pRNA.13-201ENST00000619112 90 ntBASIC32.73■■■□□ 2.83
SCAF11Q99590 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.73■■■□□ 2.83
SCAF11Q99590 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC32.72■■■□□ 2.83
SCAF11Q99590 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC32.72■■■□□ 2.83
SCAF11Q99590 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SCAF11Q99590 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
SCAF11Q99590 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
SCAF11Q99590 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SCAF11Q99590 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC32.72■■■□□ 2.83
SCAF11Q99590 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC32.72■■■□□ 2.83
SCAF11Q99590 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC32.72■■■□□ 2.83
SCAF11Q99590 NTF6G-201ENST00000591094 616 ntBASIC32.72■■■□□ 2.83
SCAF11Q99590 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC32.71■■■□□ 2.83
SCAF11Q99590 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SCAF11Q99590 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC32.71■■■□□ 2.83
SCAF11Q99590 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SCAF11Q99590 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC32.71■■■□□ 2.83
SCAF11Q99590 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SCAF11Q99590 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SCAF11Q99590 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC32.7■■■□□ 2.83
SCAF11Q99590 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC32.7■■■□□ 2.83
SCAF11Q99590 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms