Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
NOTCH4Q99466 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.6■■□□□ 1.37
NOTCH4Q99466 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.59■■□□□ 1.37
NOTCH4Q99466 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.59■■□□□ 1.37
NOTCH4Q99466 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.59■■□□□ 1.37
NOTCH4Q99466 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.59■■□□□ 1.37
NOTCH4Q99466 ALDH1A3-203ENST00000557963 1670 ntBASIC23.59■■□□□ 1.37
NOTCH4Q99466 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NOTCH4Q99466 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NOTCH4Q99466 AL161729.1-201ENST00000604104 1402 ntBASIC23.59■■□□□ 1.37
NOTCH4Q99466 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.59■■□□□ 1.37
NOTCH4Q99466 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NOTCH4Q99466 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
NOTCH4Q99466 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.58■■□□□ 1.37
NOTCH4Q99466 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NOTCH4Q99466 AC027612.3-201ENST00000413684 1047 ntBASIC23.58■■□□□ 1.37
NOTCH4Q99466 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
NOTCH4Q99466 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.58■■□□□ 1.37
NOTCH4Q99466 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NOTCH4Q99466 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.58■■□□□ 1.36
NOTCH4Q99466 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.58■■□□□ 1.36
NOTCH4Q99466 AC022211.4-201ENST00000625094 2161 ntBASIC23.57■■□□□ 1.36
NOTCH4Q99466 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NOTCH4Q99466 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NOTCH4Q99466 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NOTCH4Q99466 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NOTCH4Q99466 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
NOTCH4Q99466 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
NOTCH4Q99466 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NOTCH4Q99466 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NOTCH4Q99466 DUX4L2-201ENST00000561772 1275 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 pRNA.6-201ENST00000610482 90 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 pRNA.5-201ENST00000612139 90 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.56■■□□□ 1.36
NOTCH4Q99466 pRNA.11-201ENST00000618423 90 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 pRNA.13-201ENST00000619112 90 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 DUX4L6-201ENST00000626483 1275 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 DUX4L1-201ENST00000627662 1275 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 DUX4L8-201ENST00000629013 1275 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 DUX4L3-201ENST00000630187 1275 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 DUX4L7-201ENST00000630678 1275 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 DUX4L5-201ENST00000630834 1275 ntBASIC23.56■■□□□ 1.36
NOTCH4Q99466 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NOTCH4Q99466 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NOTCH4Q99466 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
NOTCH4Q99466 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.56■■□□□ 1.36
NOTCH4Q99466 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NOTCH4Q99466 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NOTCH4Q99466 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
NOTCH4Q99466 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.55■■□□□ 1.36
NOTCH4Q99466 KRT18P5-201ENST00000436075 1291 ntBASIC23.55■■□□□ 1.36
NOTCH4Q99466 AC126544.1-201ENST00000580842 1059 ntBASIC23.55■■□□□ 1.36
NOTCH4Q99466 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NOTCH4Q99466 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
NOTCH4Q99466 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NOTCH4Q99466 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.55■■□□□ 1.36
NOTCH4Q99466 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.55■■□□□ 1.36
NOTCH4Q99466 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NOTCH4Q99466 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NOTCH4Q99466 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NOTCH4Q99466 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NOTCH4Q99466 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NOTCH4Q99466 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.54■■□□□ 1.36
NOTCH4Q99466 AC010525.1-201ENST00000585559 441 ntBASIC23.54■■□□□ 1.36
NOTCH4Q99466 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.54■■□□□ 1.36
NOTCH4Q99466 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.54■■□□□ 1.36
NOTCH4Q99466 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NOTCH4Q99466 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NOTCH4Q99466 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NOTCH4Q99466 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NOTCH4Q99466 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.54■■□□□ 1.36
NOTCH4Q99466 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.54■■□□□ 1.36
NOTCH4Q99466 AC012414.1-201ENST00000556676 535 ntBASIC23.54■■□□□ 1.36
NOTCH4Q99466 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.54■■□□□ 1.36
NOTCH4Q99466 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NOTCH4Q99466 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NOTCH4Q99466 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
NOTCH4Q99466 TSPY26P-201ENST00000476365 1326 ntBASIC23.53■■□□□ 1.36
NOTCH4Q99466 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NOTCH4Q99466 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NOTCH4Q99466 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.53■■□□□ 1.36
NOTCH4Q99466 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NOTCH4Q99466 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.52■■□□□ 1.36
NOTCH4Q99466 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.52■■□□□ 1.36
NOTCH4Q99466 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.52■■□□□ 1.36
NOTCH4Q99466 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NOTCH4Q99466 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.52■■□□□ 1.36
NOTCH4Q99466 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.52■■□□□ 1.36
NOTCH4Q99466 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
NOTCH4Q99466 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NOTCH4Q99466 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NOTCH4Q99466 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.51■■□□□ 1.35
NOTCH4Q99466 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.51■■□□□ 1.35
NOTCH4Q99466 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.51■■□□□ 1.35
NOTCH4Q99466 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.51■■□□□ 1.35
NOTCH4Q99466 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NOTCH4Q99466 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NOTCH4Q99466 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
NOTCH4Q99466 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.5■■□□□ 1.35
NOTCH4Q99466 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms