Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.61■□□□□ 0.89
SPENQ96T58 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.61■□□□□ 0.89
SPENQ96T58 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.61■□□□□ 0.89
SPENQ96T58 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
SPENQ96T58 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.61■□□□□ 0.89
SPENQ96T58 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPENQ96T58 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SPENQ96T58 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPENQ96T58 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.61■□□□□ 0.89
SPENQ96T58 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPENQ96T58 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.61■□□□□ 0.89
SPENQ96T58 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SPENQ96T58 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPENQ96T58 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.6■□□□□ 0.89
SPENQ96T58 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.6■□□□□ 0.89
SPENQ96T58 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPENQ96T58 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SPENQ96T58 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPENQ96T58 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPENQ96T58 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPENQ96T58 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
SPENQ96T58 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPENQ96T58 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPENQ96T58 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.6■□□□□ 0.89
SPENQ96T58 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPENQ96T58 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.6■□□□□ 0.89
SPENQ96T58 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPENQ96T58 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.59■□□□□ 0.89
SPENQ96T58 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SPENQ96T58 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.59■□□□□ 0.89
SPENQ96T58 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.59■□□□□ 0.89
SPENQ96T58 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPENQ96T58 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.59■□□□□ 0.89
SPENQ96T58 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SPENQ96T58 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPENQ96T58 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPENQ96T58 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPENQ96T58 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.59■□□□□ 0.89
SPENQ96T58 AL358852.1-201ENST00000623174 1268 ntBASIC20.59■□□□□ 0.89
SPENQ96T58 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPENQ96T58 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.59■□□□□ 0.89
SPENQ96T58 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPENQ96T58 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.59■□□□□ 0.89
SPENQ96T58 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPENQ96T58 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.58■□□□□ 0.89
SPENQ96T58 MIR3181-201ENST00000578512 73 ntBASIC20.58■□□□□ 0.89
SPENQ96T58 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPENQ96T58 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPENQ96T58 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPENQ96T58 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPENQ96T58 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SPENQ96T58 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.58■□□□□ 0.88
SPENQ96T58 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPENQ96T58 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPENQ96T58 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPENQ96T58 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SPENQ96T58 KRT18P14-201ENST00000534205 1250 ntBASIC20.57■□□□□ 0.88
SPENQ96T58 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPENQ96T58 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.57■□□□□ 0.88
SPENQ96T58 AC006015.1-201ENST00000429970 570 ntBASIC20.57■□□□□ 0.88
SPENQ96T58 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.57■□□□□ 0.88
SPENQ96T58 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.57■□□□□ 0.88
SPENQ96T58 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.57■□□□□ 0.88
SPENQ96T58 CCDC92B-201ENST00000575506 885 ntBASIC20.57■□□□□ 0.88
SPENQ96T58 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.57■□□□□ 0.88
SPENQ96T58 HLA-L-211ENST00000482052 1765 ntBASIC20.56■□□□□ 0.88
SPENQ96T58 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SPENQ96T58 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPENQ96T58 CDCA4P2-201ENST00000441182 718 ntBASIC20.56■□□□□ 0.88
SPENQ96T58 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.56■□□□□ 0.88
SPENQ96T58 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPENQ96T58 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SPENQ96T58 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.56■□□□□ 0.88
SPENQ96T58 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.56■□□□□ 0.88
SPENQ96T58 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.56■□□□□ 0.88
SPENQ96T58 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.56■□□□□ 0.88
SPENQ96T58 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPENQ96T58 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SPENQ96T58 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.55■□□□□ 0.88
SPENQ96T58 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPENQ96T58 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SPENQ96T58 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPENQ96T58 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.55■□□□□ 0.88
SPENQ96T58 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.55■□□□□ 0.88
SPENQ96T58 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.55■□□□□ 0.88
SPENQ96T58 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPENQ96T58 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SPENQ96T58 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPENQ96T58 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.55■□□□□ 0.88
SPENQ96T58 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPENQ96T58 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.54■□□□□ 0.88
SPENQ96T58 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SPENQ96T58 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPENQ96T58 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
SPENQ96T58 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPENQ96T58 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPENQ96T58 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.54■□□□□ 0.88
SPENQ96T58 AC104771.1-201ENST00000603335 964 ntBASIC20.54■□□□□ 0.88
SPENQ96T58 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPENQ96T58 BX842568.3-201ENST00000418104 571 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms