Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
NR1H4Q96RI1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR1H4Q96RI1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR1H4Q96RI1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.26■□□□□ 0.99
NR1H4Q96RI1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NR1H4Q96RI1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NR1H4Q96RI1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NR1H4Q96RI1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 AC026310.3-201ENST00000625186 2373 ntBASIC21.24■□□□□ 0.99
NR1H4Q96RI1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NR1H4Q96RI1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NR1H4Q96RI1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NR1H4Q96RI1 AC092053.2-201ENST00000640557 1818 ntBASIC21.22■□□□□ 0.99
NR1H4Q96RI1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 AC021231.2-201ENST00000594613 730 ntBASIC21.21■□□□□ 0.99
NR1H4Q96RI1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NR1H4Q96RI1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NR1H4Q96RI1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NR1H4Q96RI1 DUX4L29-201ENST00000425409 679 ntBASIC21.2■□□□□ 0.98
NR1H4Q96RI1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NR1H4Q96RI1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NR1H4Q96RI1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.19■□□□□ 0.98
NR1H4Q96RI1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NR1H4Q96RI1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.19■□□□□ 0.98
NR1H4Q96RI1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.19■□□□□ 0.98
NR1H4Q96RI1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NR1H4Q96RI1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NR1H4Q96RI1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.18■□□□□ 0.98
NR1H4Q96RI1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms