Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DUX3Q96PT4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DUX3Q96PT4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DUX3Q96PT4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.49■□□□□ 0.39
DUX3Q96PT4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.49■□□□□ 0.39
DUX3Q96PT4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DUX3Q96PT4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.49■□□□□ 0.39
DUX3Q96PT4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.49■□□□□ 0.39
DUX3Q96PT4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DUX3Q96PT4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.49■□□□□ 0.39
DUX3Q96PT4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DUX3Q96PT4 ALDH1A3-203ENST00000557963 1670 ntBASIC17.48■□□□□ 0.39
DUX3Q96PT4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUX3Q96PT4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DUX3Q96PT4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.48■□□□□ 0.39
DUX3Q96PT4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUX3Q96PT4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.48■□□□□ 0.39
DUX3Q96PT4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DUX3Q96PT4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
DUX3Q96PT4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.48■□□□□ 0.39
DUX3Q96PT4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUX3Q96PT4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUX3Q96PT4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.48■□□□□ 0.39
DUX3Q96PT4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DUX3Q96PT4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUX3Q96PT4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.47■□□□□ 0.39
DUX3Q96PT4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.47■□□□□ 0.39
DUX3Q96PT4 AC142381.2-201ENST00000566120 298 ntBASIC17.47■□□□□ 0.39
DUX3Q96PT4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.47■□□□□ 0.39
DUX3Q96PT4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.47■□□□□ 0.39
DUX3Q96PT4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DUX3Q96PT4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUX3Q96PT4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUX3Q96PT4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUX3Q96PT4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DUX3Q96PT4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
DUX3Q96PT4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
DUX3Q96PT4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUX3Q96PT4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUX3Q96PT4 SYT6-210ENST00000641643 1587 ntBASIC17.46■□□□□ 0.39
DUX3Q96PT4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.46■□□□□ 0.39
DUX3Q96PT4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUX3Q96PT4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
DUX3Q96PT4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.46■□□□□ 0.39
DUX3Q96PT4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUX3Q96PT4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUX3Q96PT4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUX3Q96PT4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
DUX3Q96PT4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DUX3Q96PT4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.46■□□□□ 0.38
DUX3Q96PT4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
DUX3Q96PT4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
DUX3Q96PT4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.45■□□□□ 0.38
DUX3Q96PT4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.45■□□□□ 0.38
DUX3Q96PT4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.45■□□□□ 0.38
DUX3Q96PT4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DUX3Q96PT4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
DUX3Q96PT4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.45■□□□□ 0.38
DUX3Q96PT4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUX3Q96PT4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.44■□□□□ 0.38
DUX3Q96PT4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUX3Q96PT4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUX3Q96PT4 SERBP1P1-201ENST00000396021 1160 ntBASIC17.44■□□□□ 0.38
DUX3Q96PT4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUX3Q96PT4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DUX3Q96PT4 AC133561.4-201ENST00000566112 224 ntBASIC17.44■□□□□ 0.38
DUX3Q96PT4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.44■□□□□ 0.38
DUX3Q96PT4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUX3Q96PT4 AL161729.1-201ENST00000604104 1402 ntBASIC17.44■□□□□ 0.38
DUX3Q96PT4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUX3Q96PT4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUX3Q96PT4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.43■□□□□ 0.38
DUX3Q96PT4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUX3Q96PT4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUX3Q96PT4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUX3Q96PT4 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.43■□□□□ 0.38
DUX3Q96PT4 AC006455.2-201ENST00000429931 906 ntBASIC17.43■□□□□ 0.38
DUX3Q96PT4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.43■□□□□ 0.38
DUX3Q96PT4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUX3Q96PT4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUX3Q96PT4 C17orf82-201ENST00000623772 1530 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms