Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.17■□□□□ 0.5
RITA1Q96K30 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RITA1Q96K30 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.17■□□□□ 0.5
RITA1Q96K30 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.17■□□□□ 0.5
RITA1Q96K30 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RITA1Q96K30 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.17■□□□□ 0.5
RITA1Q96K30 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RITA1Q96K30 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.16■□□□□ 0.5
RITA1Q96K30 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.16■□□□□ 0.5
RITA1Q96K30 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.16■□□□□ 0.5
RITA1Q96K30 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RITA1Q96K30 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RITA1Q96K30 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RITA1Q96K30 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.16■□□□□ 0.5
RITA1Q96K30 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.16■□□□□ 0.5
RITA1Q96K30 UNC93B8-201ENST00000511903 705 ntBASIC18.16■□□□□ 0.5
RITA1Q96K30 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RITA1Q96K30 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RITA1Q96K30 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
RITA1Q96K30 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RITA1Q96K30 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 AC010997.5-201ENST00000609182 354 ntBASIC18.15■□□□□ 0.5
RITA1Q96K30 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.15■□□□□ 0.5
RITA1Q96K30 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RITA1Q96K30 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RITA1Q96K30 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.14■□□□□ 0.49
RITA1Q96K30 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RITA1Q96K30 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.14■□□□□ 0.49
RITA1Q96K30 MTDHP2-201ENST00000601468 714 ntBASIC18.14■□□□□ 0.49
RITA1Q96K30 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RITA1Q96K30 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RITA1Q96K30 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RITA1Q96K30 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.14■□□□□ 0.49
RITA1Q96K30 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RITA1Q96K30 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RITA1Q96K30 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RITA1Q96K30 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RITA1Q96K30 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RITA1Q96K30 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RITA1Q96K30 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.13■□□□□ 0.49
RITA1Q96K30 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.13■□□□□ 0.49
RITA1Q96K30 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RITA1Q96K30 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RITA1Q96K30 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.13■□□□□ 0.49
RITA1Q96K30 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RITA1Q96K30 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RITA1Q96K30 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RITA1Q96K30 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RITA1Q96K30 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RITA1Q96K30 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RITA1Q96K30 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RITA1Q96K30 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.12■□□□□ 0.49
RITA1Q96K30 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RITA1Q96K30 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RITA1Q96K30 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.12■□□□□ 0.49
RITA1Q96K30 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RITA1Q96K30 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RITA1Q96K30 AC005703.6-201ENST00000623265 1329 ntBASIC18.12■□□□□ 0.49
RITA1Q96K30 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RITA1Q96K30 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.12■□□□□ 0.49
RITA1Q96K30 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RITA1Q96K30 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RITA1Q96K30 AC092068.2-201ENST00000590491 1708 ntBASIC18.12■□□□□ 0.49
RITA1Q96K30 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RITA1Q96K30 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.11■□□□□ 0.49
RITA1Q96K30 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.11■□□□□ 0.49
RITA1Q96K30 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RITA1Q96K30 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RITA1Q96K30 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.1■□□□□ 0.49
RITA1Q96K30 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RITA1Q96K30 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RITA1Q96K30 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RITA1Q96K30 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RITA1Q96K30 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RITA1Q96K30 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RITA1Q96K30 GUSBP5-201ENST00000418136 578 ntBASIC18.1■□□□□ 0.49
RITA1Q96K30 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.1■□□□□ 0.49
RITA1Q96K30 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.1■□□□□ 0.49
RITA1Q96K30 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.1■□□□□ 0.49
RITA1Q96K30 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.1■□□□□ 0.49
RITA1Q96K30 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.1■□□□□ 0.49
RITA1Q96K30 AC133561.1-201ENST00000568600 2415 ntBASIC18.1■□□□□ 0.49
RITA1Q96K30 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms