Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.82■■□□□ 1.72
USP6NLQ92738 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
USP6NLQ92738 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.82■■□□□ 1.72
USP6NLQ92738 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.82■■□□□ 1.72
USP6NLQ92738 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
USP6NLQ92738 AL358852.1-201ENST00000623174 1268 ntBASIC25.82■■□□□ 1.72
USP6NLQ92738 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.82■■□□□ 1.72
USP6NLQ92738 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.82■■□□□ 1.72
USP6NLQ92738 AL161729.1-201ENST00000604104 1402 ntBASIC25.81■■□□□ 1.72
USP6NLQ92738 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.81■■□□□ 1.72
USP6NLQ92738 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
USP6NLQ92738 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
USP6NLQ92738 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.81■■□□□ 1.72
USP6NLQ92738 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.81■■□□□ 1.72
USP6NLQ92738 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.81■■□□□ 1.72
USP6NLQ92738 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.81■■□□□ 1.72
USP6NLQ92738 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.81■■□□□ 1.72
USP6NLQ92738 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.81■■□□□ 1.72
USP6NLQ92738 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
USP6NLQ92738 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
USP6NLQ92738 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.81■■□□□ 1.72
USP6NLQ92738 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
USP6NLQ92738 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
USP6NLQ92738 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
USP6NLQ92738 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
USP6NLQ92738 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
USP6NLQ92738 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
USP6NLQ92738 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.79■■□□□ 1.72
USP6NLQ92738 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.79■■□□□ 1.72
USP6NLQ92738 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.79■■□□□ 1.72
USP6NLQ92738 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
USP6NLQ92738 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
USP6NLQ92738 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
USP6NLQ92738 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
USP6NLQ92738 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.79■■□□□ 1.72
USP6NLQ92738 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
USP6NLQ92738 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.78■■□□□ 1.72
USP6NLQ92738 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
USP6NLQ92738 AC141586.4-201ENST00000624558 1573 ntBASIC25.78■■□□□ 1.72
USP6NLQ92738 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
USP6NLQ92738 MIR572-201ENST00000384983 95 ntBASIC25.78■■□□□ 1.72
USP6NLQ92738 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
USP6NLQ92738 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
USP6NLQ92738 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
USP6NLQ92738 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
USP6NLQ92738 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.78■■□□□ 1.72
USP6NLQ92738 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
USP6NLQ92738 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
USP6NLQ92738 IGHV3-19-201ENST00000521488 291 ntBASIC25.77■■□□□ 1.72
USP6NLQ92738 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
USP6NLQ92738 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
USP6NLQ92738 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.77■■□□□ 1.72
USP6NLQ92738 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
USP6NLQ92738 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.77■■□□□ 1.72
USP6NLQ92738 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
USP6NLQ92738 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.76■■□□□ 1.71
USP6NLQ92738 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.76■■□□□ 1.71
USP6NLQ92738 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
USP6NLQ92738 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
USP6NLQ92738 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
USP6NLQ92738 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
USP6NLQ92738 DUSP8P4-201ENST00000399538 1761 ntBASIC25.76■■□□□ 1.71
USP6NLQ92738 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.76■■□□□ 1.71
USP6NLQ92738 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
USP6NLQ92738 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
USP6NLQ92738 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
USP6NLQ92738 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
USP6NLQ92738 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.74■■□□□ 1.71
USP6NLQ92738 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
USP6NLQ92738 MIR6084-201ENST00000622012 110 ntBASIC25.74■■□□□ 1.71
USP6NLQ92738 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
USP6NLQ92738 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
USP6NLQ92738 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.74■■□□□ 1.71
USP6NLQ92738 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
USP6NLQ92738 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.73■■□□□ 1.71
USP6NLQ92738 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
USP6NLQ92738 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
USP6NLQ92738 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.73■■□□□ 1.71
USP6NLQ92738 AC004911.1-201ENST00000416316 871 ntBASIC25.73■■□□□ 1.71
USP6NLQ92738 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.73■■□□□ 1.71
USP6NLQ92738 AC012414.1-201ENST00000556676 535 ntBASIC25.73■■□□□ 1.71
USP6NLQ92738 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.73■■□□□ 1.71
USP6NLQ92738 CCDC92B-201ENST00000575506 885 ntBASIC25.73■■□□□ 1.71
USP6NLQ92738 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
USP6NLQ92738 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
USP6NLQ92738 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.72■■□□□ 1.71
USP6NLQ92738 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
USP6NLQ92738 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
USP6NLQ92738 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
USP6NLQ92738 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
USP6NLQ92738 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.72■■□□□ 1.71
USP6NLQ92738 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
USP6NLQ92738 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.72■■□□□ 1.71
USP6NLQ92738 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.72■■□□□ 1.71
USP6NLQ92738 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.72■■□□□ 1.71
USP6NLQ92738 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
USP6NLQ92738 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
USP6NLQ92738 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.72■■□□□ 1.71
USP6NLQ92738 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
USP6NLQ92738 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms