Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 C9orf163-202ENST00000624034 2573 ntBASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 AC092028.1-203ENST00000608262 953 ntBASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH19Q8TAB3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 AC131212.1-201ENST00000613771 668 ntBASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 MIR6722-201ENST00000617286 78 ntBASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PCDH19Q8TAB3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 KRT125P-201ENST00000546827 989 ntBASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH19Q8TAB3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 MIR4787-201ENST00000607364 84 ntBASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 AC068473.5-201ENST00000616428 2072 ntBASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 DUSP8P3-201ENST00000399571 1760 ntBASIC23.35■■□□□ 1.33
PCDH19Q8TAB3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.34■■□□□ 1.33
PCDH19Q8TAB3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH19Q8TAB3 AC133561.1-201ENST00000568600 2415 ntBASIC23.33■■□□□ 1.33
PCDH19Q8TAB3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH19Q8TAB3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDH19Q8TAB3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH19Q8TAB3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.33
PCDH19Q8TAB3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
PCDH19Q8TAB3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH19Q8TAB3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH19Q8TAB3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.33■■□□□ 1.32
PCDH19Q8TAB3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH19Q8TAB3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PCDH19Q8TAB3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PCDH19Q8TAB3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDH19Q8TAB3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH19Q8TAB3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH19Q8TAB3 AL356441.2-201ENST00000443009 864 ntBASIC23.32■■□□□ 1.32
PCDH19Q8TAB3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PCDH19Q8TAB3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH19Q8TAB3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDH19Q8TAB3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH19Q8TAB3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH19Q8TAB3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDH19Q8TAB3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH19Q8TAB3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH19Q8TAB3 AC079630.1-202ENST00000618127 1840 ntBASIC23.31■■□□□ 1.32
PCDH19Q8TAB3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH19Q8TAB3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH19Q8TAB3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms