Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHCBP1Q8NEM2 AC034268.1-201ENST00000441047 882 ntBASIC25.87■■□□□ 1.73
SHCBP1Q8NEM2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHCBP1Q8NEM2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SHCBP1Q8NEM2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.87■■□□□ 1.73
SHCBP1Q8NEM2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
SHCBP1Q8NEM2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SHCBP1Q8NEM2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SHCBP1Q8NEM2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 YBX1P1-201ENST00000445822 960 ntBASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 TSPY26P-201ENST00000476365 1326 ntBASIC25.86■■□□□ 1.73
SHCBP1Q8NEM2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.85■■□□□ 1.73
SHCBP1Q8NEM2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
SHCBP1Q8NEM2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.85■■□□□ 1.73
SHCBP1Q8NEM2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SHCBP1Q8NEM2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.85■■□□□ 1.73
SHCBP1Q8NEM2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SHCBP1Q8NEM2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SHCBP1Q8NEM2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.84■■□□□ 1.73
SHCBP1Q8NEM2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.84■■□□□ 1.73
SHCBP1Q8NEM2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.84■■□□□ 1.73
SHCBP1Q8NEM2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SHCBP1Q8NEM2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SHCBP1Q8NEM2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SHCBP1Q8NEM2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.83■■□□□ 1.73
SHCBP1Q8NEM2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.83■■□□□ 1.73
SHCBP1Q8NEM2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.83■■□□□ 1.73
SHCBP1Q8NEM2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.83■■□□□ 1.73
SHCBP1Q8NEM2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.83■■□□□ 1.72
SHCBP1Q8NEM2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 IGHV3-19-201ENST00000521488 291 ntBASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 AL358852.1-201ENST00000623174 1268 ntBASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.82■■□□□ 1.72
SHCBP1Q8NEM2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SHCBP1Q8NEM2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 AC027612.3-201ENST00000413684 1047 ntBASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
SHCBP1Q8NEM2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 AL499627.2-201ENST00000606283 725 ntBASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SHCBP1Q8NEM2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 MIR572-201ENST00000384983 95 ntBASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 AL031602.1-201ENST00000633169 911 ntBASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 AC133637.1-201ENST00000624115 1537 ntBASIC25.78■■□□□ 1.72
SHCBP1Q8NEM2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 AC123595.1-201ENST00000440769 1046 ntBASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms