Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 SNX5-217ENST00000606557 1087 ntBASIC22.46■■□□□ 1.19
PHC3Q8NDX5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
PHC3Q8NDX5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.45■■□□□ 1.18
PHC3Q8NDX5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 AL022069.1-201ENST00000568025 1636 ntBASIC22.45■■□□□ 1.18
PHC3Q8NDX5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PHC3Q8NDX5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 AC004448.1-201ENST00000458332 883 ntBASIC22.44■■□□□ 1.18
PHC3Q8NDX5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.44■■□□□ 1.18
PHC3Q8NDX5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PHC3Q8NDX5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PHC3Q8NDX5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PHC3Q8NDX5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PHC3Q8NDX5 AL356441.2-201ENST00000443009 864 ntBASIC22.42■■□□□ 1.18
PHC3Q8NDX5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.42■■□□□ 1.18
PHC3Q8NDX5 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.42■■□□□ 1.18
PHC3Q8NDX5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.42■■□□□ 1.18
PHC3Q8NDX5 AC010997.5-201ENST00000609182 354 ntBASIC22.42■■□□□ 1.18
PHC3Q8NDX5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PHC3Q8NDX5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PHC3Q8NDX5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 KRT16P3-201ENST00000439127 1283 ntBASIC22.41■■□□□ 1.18
PHC3Q8NDX5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 MTDHP2-201ENST00000601468 714 ntBASIC22.41■■□□□ 1.18
PHC3Q8NDX5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.41■■□□□ 1.18
PHC3Q8NDX5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 LINC00565-201ENST00000562710 2331 ntBASIC22.4■■□□□ 1.18
PHC3Q8NDX5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PHC3Q8NDX5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PHC3Q8NDX5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.39■■□□□ 1.18
PHC3Q8NDX5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.39■■□□□ 1.18
PHC3Q8NDX5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PHC3Q8NDX5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PHC3Q8NDX5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PHC3Q8NDX5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.39■■□□□ 1.17
PHC3Q8NDX5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
PHC3Q8NDX5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PHC3Q8NDX5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PHC3Q8NDX5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PHC3Q8NDX5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PHC3Q8NDX5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms