Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 SLC6A10P-202ENST00000431994 2058 ntBASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.67■■□□□ 1.38
SMRP1Q8NCR6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMRP1Q8NCR6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.66■■□□□ 1.38
SMRP1Q8NCR6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMRP1Q8NCR6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.66■■□□□ 1.38
SMRP1Q8NCR6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SMRP1Q8NCR6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SMRP1Q8NCR6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.66■■□□□ 1.38
SMRP1Q8NCR6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMRP1Q8NCR6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SMRP1Q8NCR6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.65■■□□□ 1.38
SMRP1Q8NCR6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.65■■□□□ 1.38
SMRP1Q8NCR6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMRP1Q8NCR6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
SMRP1Q8NCR6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.65■■□□□ 1.38
SMRP1Q8NCR6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMRP1Q8NCR6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SMRP1Q8NCR6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMRP1Q8NCR6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SMRP1Q8NCR6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMRP1Q8NCR6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMRP1Q8NCR6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 RAP2CP1-201ENST00000605103 478 ntBASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 AC080038.1-201ENST00000611274 1154 ntBASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMRP1Q8NCR6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMRP1Q8NCR6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 AC006015.1-201ENST00000429970 570 ntBASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.61■■□□□ 1.37
SMRP1Q8NCR6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.6■■□□□ 1.37
SMRP1Q8NCR6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMRP1Q8NCR6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.6■■□□□ 1.37
SMRP1Q8NCR6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SMRP1Q8NCR6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SMRP1Q8NCR6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SMRP1Q8NCR6 AC133637.1-201ENST00000624115 1537 ntBASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 AL161729.1-201ENST00000604104 1402 ntBASIC23.59■■□□□ 1.37
SMRP1Q8NCR6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SMRP1Q8NCR6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.58■■□□□ 1.37
SMRP1Q8NCR6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SMRP1Q8NCR6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SMRP1Q8NCR6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SMRP1Q8NCR6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.58■■□□□ 1.37
SMRP1Q8NCR6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms