Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
C11orf42Q8N5U0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C11orf42Q8N5U0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C11orf42Q8N5U0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 AC005703.6-201ENST00000623265 1329 ntBASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C11orf42Q8N5U0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
C11orf42Q8N5U0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.66■□□□□ 0.58
C11orf42Q8N5U0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 MIR3621-201ENST00000580529 85 ntBASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 AL117332.1-201ENST00000622628 974 ntBASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C11orf42Q8N5U0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C11orf42Q8N5U0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf42Q8N5U0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf42Q8N5U0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf42Q8N5U0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf42Q8N5U0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf42Q8N5U0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C11orf42Q8N5U0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.63■□□□□ 0.57
C11orf42Q8N5U0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms