Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB42Q8N4Z0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RAB42Q8N4Z0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB42Q8N4Z0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB42Q8N4Z0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB42Q8N4Z0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.89■■□□□ 1.1
RAB42Q8N4Z0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAB42Q8N4Z0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RAB42Q8N4Z0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.89■■□□□ 1.09
RAB42Q8N4Z0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.89■■□□□ 1.09
RAB42Q8N4Z0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAB42Q8N4Z0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAB42Q8N4Z0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAB42Q8N4Z0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.89■■□□□ 1.09
RAB42Q8N4Z0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAB42Q8N4Z0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB42Q8N4Z0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB42Q8N4Z0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB42Q8N4Z0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB42Q8N4Z0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB42Q8N4Z0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RAB42Q8N4Z0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB42Q8N4Z0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB42Q8N4Z0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB42Q8N4Z0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB42Q8N4Z0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.86■■□□□ 1.09
RAB42Q8N4Z0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB42Q8N4Z0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms