Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL27A1Q8IZC6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL27A1Q8IZC6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.63■■□□□ 1.05
COL27A1Q8IZC6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 pRNA.6-201ENST00000610482 90 ntBASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 pRNA.5-201ENST00000612139 90 ntBASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 pRNA.11-201ENST00000618423 90 ntBASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 pRNA.13-201ENST00000619112 90 ntBASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 HLA-L-211ENST00000482052 1765 ntBASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 AC010525.1-201ENST00000585559 441 ntBASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 AC022517.1-201ENST00000592429 346 ntBASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL27A1Q8IZC6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 AL161729.1-201ENST00000604104 1402 ntBASIC21.61■■□□□ 1.05
COL27A1Q8IZC6 MIR572-201ENST00000384983 95 ntBASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.6■■□□□ 1.05
COL27A1Q8IZC6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 ALDH1A3-203ENST00000557963 1670 ntBASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.59■■□□□ 1.05
COL27A1Q8IZC6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 AC145676.1-201ENST00000514988 2004 ntBASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.58■■□□□ 1.05
COL27A1Q8IZC6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.58■■□□□ 1.04
COL27A1Q8IZC6 AC123595.1-201ENST00000440769 1046 ntBASIC21.58■■□□□ 1.04
COL27A1Q8IZC6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL27A1Q8IZC6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL27A1Q8IZC6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.58■■□□□ 1.04
COL27A1Q8IZC6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 AL358852.1-201ENST00000623174 1268 ntBASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL27A1Q8IZC6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 KRT18P14-201ENST00000534205 1250 ntBASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 CCDC92B-201ENST00000575506 885 ntBASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL27A1Q8IZC6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
COL27A1Q8IZC6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms