Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AC079630.1-202ENST00000618127 1840 ntBASIC28.12■■■□□ 2.09
SMC5Q8IY18 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.12■■■□□ 2.09
SMC5Q8IY18 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SMC5Q8IY18 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SMC5Q8IY18 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SMC5Q8IY18 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMC5Q8IY18 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMC5Q8IY18 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC28.11■■■□□ 2.09
SMC5Q8IY18 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMC5Q8IY18 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SMC5Q8IY18 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMC5Q8IY18 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMC5Q8IY18 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMC5Q8IY18 AL031848.2-201ENST00000607670 837 ntBASIC28.1■■■□□ 2.09
SMC5Q8IY18 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMC5Q8IY18 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMC5Q8IY18 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SMC5Q8IY18 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SMC5Q8IY18 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SMC5Q8IY18 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SMC5Q8IY18 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
SMC5Q8IY18 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SMC5Q8IY18 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
SMC5Q8IY18 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SMC5Q8IY18 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SMC5Q8IY18 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
SMC5Q8IY18 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
SMC5Q8IY18 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
SMC5Q8IY18 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.08■■■□□ 2.09
SMC5Q8IY18 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.08■■■□□ 2.09
SMC5Q8IY18 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC28.08■■■□□ 2.09
SMC5Q8IY18 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
SMC5Q8IY18 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
SMC5Q8IY18 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.07■■■□□ 2.08
SMC5Q8IY18 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.07■■■□□ 2.08
SMC5Q8IY18 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
SMC5Q8IY18 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.07■■■□□ 2.08
SMC5Q8IY18 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC28.06■■■□□ 2.08
SMC5Q8IY18 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.06■■■□□ 2.08
SMC5Q8IY18 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SMC5Q8IY18 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
SMC5Q8IY18 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC5Q8IY18 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.06■■■□□ 2.08
SMC5Q8IY18 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.06■■■□□ 2.08
SMC5Q8IY18 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC5Q8IY18 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC5Q8IY18 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC5Q8IY18 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC5Q8IY18 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SMC5Q8IY18 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SMC5Q8IY18 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SMC5Q8IY18 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SMC5Q8IY18 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.05■■■□□ 2.08
SMC5Q8IY18 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
SMC5Q8IY18 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
SMC5Q8IY18 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SMC5Q8IY18 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
SMC5Q8IY18 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.05■■■□□ 2.08
SMC5Q8IY18 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SMC5Q8IY18 AC021242.3-201ENST00000607598 1377 ntBASIC28.05■■■□□ 2.08
SMC5Q8IY18 C1orf229-201ENST00000623686 2258 ntBASIC28.05■■■□□ 2.08
SMC5Q8IY18 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
SMC5Q8IY18 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC28.04■■■□□ 2.08
SMC5Q8IY18 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC28.04■■■□□ 2.08
SMC5Q8IY18 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.04■■■□□ 2.08
SMC5Q8IY18 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.04■■■□□ 2.08
SMC5Q8IY18 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SMC5Q8IY18 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.04■■■□□ 2.08
SMC5Q8IY18 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SMC5Q8IY18 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
SMC5Q8IY18 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.03■■■□□ 2.08
SMC5Q8IY18 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SMC5Q8IY18 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SMC5Q8IY18 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.02■■■□□ 2.08
SMC5Q8IY18 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.02■■■□□ 2.08
SMC5Q8IY18 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SMC5Q8IY18 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
SMC5Q8IY18 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.02■■■□□ 2.08
SMC5Q8IY18 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.02■■■□□ 2.08
SMC5Q8IY18 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SMC5Q8IY18 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SMC5Q8IY18 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC28.02■■■□□ 2.08
SMC5Q8IY18 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
SMC5Q8IY18 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.01■■■□□ 2.07
SMC5Q8IY18 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
SMC5Q8IY18 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SMC5Q8IY18 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SMC5Q8IY18 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SMC5Q8IY18 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.01■■■□□ 2.07
SMC5Q8IY18 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SMC5Q8IY18 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
SMC5Q8IY18 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms