Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF135Q8IUD6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.91■■□□□ 1.42
RNF135Q8IUD6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF135Q8IUD6 AC136469.2-201ENST00000623944 1028 ntBASIC23.91■■□□□ 1.42
RNF135Q8IUD6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF135Q8IUD6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RNF135Q8IUD6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF135Q8IUD6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RNF135Q8IUD6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF135Q8IUD6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF135Q8IUD6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
RNF135Q8IUD6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF135Q8IUD6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RNF135Q8IUD6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 BX842568.3-201ENST00000418104 571 ntBASIC23.88■■□□□ 1.41
RNF135Q8IUD6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF135Q8IUD6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 HLA-L-209ENST00000420110 1011 ntBASIC23.87■■□□□ 1.41
RNF135Q8IUD6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RNF135Q8IUD6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
RNF135Q8IUD6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF135Q8IUD6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF135Q8IUD6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF135Q8IUD6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF135Q8IUD6 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.83■■□□□ 1.41
RNF135Q8IUD6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.83■■□□□ 1.41
RNF135Q8IUD6 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.83■■□□□ 1.41
RNF135Q8IUD6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF135Q8IUD6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF135Q8IUD6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
RNF135Q8IUD6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
RNF135Q8IUD6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RNF135Q8IUD6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.83■■□□□ 1.4
RNF135Q8IUD6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms